RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 KBTBD7Q8WVZ9 684 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 PGBD4Q96DM1 585 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 TBCBQ99426 244 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 LSM14BQ9BX40 385 aaKnown RBP6.13□□□□□ -1.43
SF3B3-214ENST00000572365 EPC1Q9H2F5 836 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 KIAA1586Q9HCI6 787 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 RLIMQ9NVW2 624 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 JKAMPQ9P055 326 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-214ENST00000572365 TAGLN3Q9UI15 199 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 CTNNA3Q9UI47 895 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 ISY1Q9ULR0 285 aaKnown RBP6.13□□□□□ -1.43
SF3B3-214ENST00000572365 BARX2Q9UMQ3 279 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-214ENST00000572365 ROBO3Q96MS0 1386 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 RALGAPA2Q2PPJ7 1873 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 LCTP09848 1927 aa6.13□□□□□ -1.43
SF3B3-214ENST00000572365 DBX1A6NMT0 343 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 RHPN2P1A8MT19 583 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 LOC730098B7Z3J9 87 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 RASA4BC9J798 803 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 PER2O15055 1255 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 TBX3O15119 743 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 WDR46O15213 610 aaKnown RBP6.12□□□□□ -1.43
SF3B3-214ENST00000572365 RASA4O43374 803 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 BAIAP3O94812 1187 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 AMHP03971 560 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 ALAS1P13196 640 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 RFC2P35250 354 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 TXKP42681 527 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 SOX8P57073 446 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 GABPAQ06546 454 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 BFSP2Q13515 415 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 IL16Q14005 1332 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 GRM7Q14831 915 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 CNGA2Q16280 664 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 PDS5AQ29RF7 1337 aaKnown RBP6.12□□□□□ -1.43
SF3B3-214ENST00000572365 CHST3Q7LGC8 479 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 SMC5Q8IY18 1101 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 OR6J1Q8NGC5 347 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 ZSCAN18Q8TBC5 510 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-214ENST00000572365 TNPO1Q92973 898 aaKnown RBP6.12□□□□□ -1.43
SF3B3-214ENST00000572365 CCDC138Q96M89 665 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 CTAGE1Q96RT6 745 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 YME1L1Q96TA2 773 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 SLF1Q9BQI6 1058 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 MTG1Q9BT17 334 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-214ENST00000572365 TEX13BQ9BXU2 312 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 PACSIN1Q9BY11 444 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 TRIM54Q9BYV2 358 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 PLA2G3Q9NZ20 509 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 HECAQ9UBI9 543 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-214ENST00000572365 MED16Q9Y2X0 877 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 USP15Q9Y4E8 981 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-214ENST00000572365 INSL6Q9Y581 213 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 SPEGQ15772 3267 aa6.12□□□□□ -1.43
SF3B3-214ENST00000572365 ZFYVE26Q68DK2 2539 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 FAM208BQ5VWN6 2430 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 GPR179Q6PRD1 2367 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 OTOGLQ3ZCN5 2332 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 SDK1Q7Z5N4 2213 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 DOCK8Q8NF50 2099 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 RALGAPA1Q6GYQ0 2036 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 KIAA0391O15091 583 aaKnown RBP6.11□□□□□ -1.43
SF3B3-214ENST00000572365 ZBED4O75132 1171 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 POMCP01189 267 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 GNAI3P08754 354 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 CKBP12277 381 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 HDCP19113 662 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 DNAJB1P25685 340 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 CTNNB1P35222 781 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 FMO1Q01740 532 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 PUM1Q14671 1186 aaKnown RBP eCLIP6.11□□□□□ -1.43
SF3B3-214ENST00000572365 CSRP2Q16527 193 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 ZNF618Q5T7W0 954 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 DRICH1Q6PGQ1 229 aaPredicted RBP6.11□□□□□ -1.43
SF3B3-214ENST00000572365 TMEM179Q6ZVK1 233 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 LRRC8DQ7L1W4 858 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 XYLT1Q86Y38 959 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 PDSS2Q86YH6 399 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 DBF4BQ8NFT6 615 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 ZFP28Q8NHY6 868 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 TMEM176AQ96HP8 235 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 ZC3H10Q96K80 434 aaKnown RBP6.11□□□□□ -1.43
SF3B3-214ENST00000572365 MSLNLQ96KJ4 702 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 GNRHR2Q96P88 292 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 KCNC2Q96PR1 638 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 MEIS3Q99687 375 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 DPH1Q9BZG8 443 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 WDR11Q9BZH6 1224 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 ZNF287Q9HBT7 754 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 PPP4R1LQ9P1A2 415 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 CFAP97Q9P2B7 532 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 CLCA2Q9UQC9 943 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 SLC30A1Q9Y6M5 507 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 LOXHD1Q8IVV2 1947 aa6.11□□□□□ -1.43
SF3B3-214ENST00000572365 KAT6AQ92794 2004 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 LOC102724159A0A0B4J2E5 919 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 ABHD14A-ACY1A0A1B0GW23 586 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 HAUS5O94927 633 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms