RNA–Protein interactions for RNA: ENST00000559741.5

PSME1-206, Transcript of proteasome activator subunit 1, human

TSL 3

Gene PSME1, Length 763 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME1-206	ENST00000559741	LMNA	P02545	664 aa	Known RBP	10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	CYP1A1	P04798	512 aa	Predicted RBP	10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	CISD3	P0C7P0	127 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	CCDC172	P0C7W6	258 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	GBP1	P32455	592 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	NOS2	P35228	1153 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	CDK17	Q00537	523 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	FMO1	Q01740	532 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	KDSR	Q06136	332 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	MTA1	Q13330	715 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	DMC1	Q14565	340 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	NR1I3	Q14994	352 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	E2F5	Q15329	346 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	TAF5	Q15542	800 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	C2orf27A	Q580R0	203 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	DCAF6	Q58WW2	860 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	FAM133B	Q5BKY9	247 aa	Known RBP	10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	RNF43	Q68DV7	783 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	TRIM72	Q6ZMU5	477 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	ARC	Q7LC44	396 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	CACNA2D4	Q7Z3S7	1137 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	TRMT11	Q7Z4G4	463 aa	Known RBP	10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	TAC4	Q86UU9	113 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	ZNF557	Q8N988	423 aa	Predicted RBP	10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	IL17RC	Q8NAC3	791 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	SUMF1	Q8NBK3	374 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	DDI1	Q8WTU0	396 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	P2RY11	Q96G91	374 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	DDX50	Q9BQ39	737 aa	Known RBP	10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	EPC1	Q9H2F5	836 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	PLK2	Q9NYY3	685 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	EBF1	Q9UH73	591 aa		10.42	□□□□□ -0.74
PSME1-206	ENST00000559741	WDR87	Q6ZQQ6	2873 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	NPC1	O15118	1278 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	TRIM24	O15164	1050 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	DAB1	O75553	588 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	APBB3	O95704	486 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	SERPINC1	P01008	464 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	SLC2A3	P11169	496 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	UNG	P13051	313 aa	Predicted RBP	10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	HNRNPL	P14866	589 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	FER	P16591	822 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	CHRNB2	P17787	502 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	HOXD9	P28356	352 aa	Predicted RBP	10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	TIE1	P35590	1138 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	MATK	P42679	507 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	DGKE	P52429	567 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	SEC13	P55735	322 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	EIF4H	Q15056	248 aa	Known RBP	10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	CRY1	Q16526	586 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	EOGT	Q5NDL2	527 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	C10orf76	Q5T2E6	689 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	PIK3R6	Q5UE93	754 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	ASCL5	Q7RTU5	278 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	LUZP1	Q86V48	1076 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	XYLT1	Q86Y38	959 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	SFTPA1	Q8IWL2	248 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	DEFB106A	Q8N104	65 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	SLC20A1	Q8WUM9	679 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	BHMT	Q93088	406 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	NT5C3B	Q969T7	300 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	TMA16	Q96EY4	203 aa	Known RBP	10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	PGAP3	Q96FM1	320 aa	Predicted RBP	10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	BTN2A3P	Q96KV6	586 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	EDEM3	Q9BZQ6	932 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	SLC12A6	Q9UHW9	1150 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	ATG2B	Q96BY7	2078 aa		10.41	□□□□□ -0.74
PSME1-206	ENST00000559741	PTPRZ1	P23471	2315 aa	Predicted RBP	10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	KCNU1	A8MYU2	1149 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	PRRT4	C9JH25	899 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	GOLGA6L19	H0YKK7	550 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	KLF8	O95600	359 aa	Predicted RBP	10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	APOE	P02649	317 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	MMP8	P22894	467 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	NTSR1	P30989	418 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	SLC6A4	P31645	630 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	CCR1	P32246	355 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	FNTB	P49356	437 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	GSC	P56915	257 aa	Predicted RBP	10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	PITX1	P78337	314 aa	Predicted RBP	10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	FANCC	Q00597	558 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	FOXK2	Q01167	660 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	CENPC	Q03188	943 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	DMWD	Q09019	674 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	FIGN	Q5HY92	759 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	EMC10	Q5UCC4	262 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	NAA35	Q5VZE5	725 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	IRF2BP2	Q7Z5L9	587 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	ALLC	Q8N6M5	410 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	ATP6V0D2	Q8N8Y2	350 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	TXNDC5	Q8NBS9	432 aa	Known RBP	10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	ADAM32	Q8TC27	787 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	CPA5	Q8WXQ8	436 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	BAP1	Q92560	729 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	NPY6R	Q99463	290 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	TTYH3	Q9C0H2	523 aa		10.4	□□□□□ -0.74
PSME1-206	ENST00000559741	FAM204A	Q9H8W3	233 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms