RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 NEU3Q9UQ49 428 aa11.28□□□□□ -0.6
PABPN1-203ENST00000553960 UTP11Q9Y3A2 253 aaKnown RBP11.28□□□□□ -0.6
PABPN1-203ENST00000553960 DRGXA6NNA5 263 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 GFRA2O00451 464 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 APOL1O14791 398 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 MTSS1O43312 755 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 TGM5O43548 720 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 RARGP13631 454 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 ITIH2P19823 946 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 DDX6P26196 483 aaKnown RBP eCLIP11.27□□□□□ -0.61
PABPN1-203ENST00000553960 ATP5C1P36542 298 aaKnown RBP11.27□□□□□ -0.61
PABPN1-203ENST00000553960 CLCN4P51793 760 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 CDO1Q16878 200 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 RAB6CQ53S08 254 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 BEND6Q5SZJ8 279 aaPredicted RBP11.27□□□□□ -0.61
PABPN1-203ENST00000553960 ARMC3Q5W041 872 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 AFMIDQ63HM1 303 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 RNF43Q68DV7 783 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 ELMSAN1Q6PJG2 1045 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 RFX8Q6ZV50 586 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 TMCO2Q7Z6W1 182 aaPredicted RBP11.27□□□□□ -0.61
PABPN1-203ENST00000553960 DNAJB7Q7Z6W7 309 aaPredicted RBP11.27□□□□□ -0.61
PABPN1-203ENST00000553960 TMEM150AQ86TG1 271 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 FAM131BQ86XD5 332 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 KLHDC8BQ8IXV7 354 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 ACTL9Q8TC94 416 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 AENQ8WTP8 325 aaKnown RBP11.27□□□□□ -0.61
PABPN1-203ENST00000553960 SLC22A17Q8WUG5 538 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 NDRG1Q92597 394 aaKnown RBP11.27□□□□□ -0.61
PABPN1-203ENST00000553960 P3H4Q92791 437 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 CASP10Q92851 521 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 PLD4Q96BZ4 506 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 HAUS1Q96CS2 278 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 PGLYRP2Q96PD5 576 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 TSGA13Q96PP4 275 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 KCTD15Q96SI1 283 aaPredicted RBP11.27□□□□□ -0.61
PABPN1-203ENST00000553960 CDCA3Q99618 268 aaPredicted RBP11.27□□□□□ -0.61
PABPN1-203ENST00000553960 MAK16Q9BXY0 300 aaKnown RBP11.27□□□□□ -0.61
PABPN1-203ENST00000553960 RAB6CQ9H0N0 254 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 VIPAS39Q9H9C1 493 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 IL21Q9HBE4 155 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 ARFGAP3Q9NP61 516 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 ARHGEF4Q9NR80 690 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 ZDHHC7Q9NXF8 308 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 TRPM5Q9NZQ8 1165 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 GMIPQ9P107 970 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 OR12D3Q9UGF7 316 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 DNMT3LQ9UJW3 386 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 SLC27A5Q9Y2P5 690 aa11.27□□□□□ -0.61
PABPN1-203ENST00000553960 GBF1Q92538 1859 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 LCHNA4D1U4 455 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 TP73O15350 636 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 TLR5O60602 858 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 ZMYND10O75800 440 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 HEXIM1O94992 359 aaKnown RBP11.26□□□□□ -0.61
PABPN1-203ENST00000553960 GLUD1P00367 558 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 CD48P09326 243 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 KRT10P13645 584 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 ECHS1P30084 290 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 CTNNB1P35222 781 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 SERPINB6P35237 376 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 SSR1P43307 286 aaKnown RBP11.26□□□□□ -0.61
PABPN1-203ENST00000553960 GPR15P49685 360 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 PGFP49763 221 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 RGS19P49795 217 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 DNA2P51530 1060 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 ERVFC1P60507 584 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 VSNL1P62760 191 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 SLC7A9P82251 487 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 TNK2Q07912 1038 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 KCNC3Q14003 757 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 KRT81Q14533 505 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 SHHQ15465 462 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 CA9Q16790 459 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 SMTNL2Q2TAL5 461 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 ZC3H12AQ5D1E8 599 aaKnown RBP11.26□□□□□ -0.61
PABPN1-203ENST00000553960 HECTD3Q5T447 861 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 FAM117BQ6P1L5 589 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 SCYL2Q6P3W7 929 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 RHBDF2Q6PJF5 856 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 TMEM184AQ6ZMB5 413 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 CEP128Q6ZU80 1094 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 TMC7Q7Z402 723 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 FAM217AQ8IXS0 508 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 ATP6V0D2Q8N8Y2 350 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 POF1BQ8WVV4 589 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 HSPH1Q92598 858 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 SEPT5Q99719 369 aaPredicted RBP11.26□□□□□ -0.61
PABPN1-203ENST00000553960 PRMT1Q99873 361 aaKnown RBP11.26□□□□□ -0.61
PABPN1-203ENST00000553960 CALN1Q9BXU9 219 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 FRMD8Q9BZ67 464 aaPredicted RBP11.26□□□□□ -0.61
PABPN1-203ENST00000553960 TKTL2Q9H0I9 626 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 DHX35Q9H5Z1 703 aaKnown RBP11.26□□□□□ -0.61
PABPN1-203ENST00000553960 FAM204AQ9H8W3 233 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 CYP4F11Q9HBI6 524 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 USP29Q9HBJ7 922 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 ZDHHC18Q9NUE0 388 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 MARCH2Q9P0N8 246 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 SLC12A6Q9UHW9 1150 aa11.26□□□□□ -0.61
PABPN1-203ENST00000553960 ZMYND8Q9ULU4 1186 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms