RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 GPR174Q9BXC1 333 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 MKRN2Q9H000 416 aaKnown RBP7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 TNMDQ9H2S6 317 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 CAPN10Q9HC96 672 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 DMAP1Q9NPF5 467 aaPredicted RBP7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 GOLGA4Q13439 2230 aaKnown RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 A0A0A0MRY4 1105 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 SOBPA7XYQ1 873 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 SLC9A3R1O14745 358 aaPredicted RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 HOXC11O43248 304 aaPredicted RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 FOXD2O60548 495 aaPredicted RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 CUTAO60888 179 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 STC2O76061 302 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 RTN3O95197 1032 aaPredicted RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 NR3C1P04150 777 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 ZDHHC11BP0C7U3 371 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 PDCP20941 246 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 CSRP1P21291 193 aaKnown RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 PRKCHP24723 683 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 NTSR1P30989 418 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 PIK3CAP42336 1068 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 IL12RB1P42701 662 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 SGSHP51688 502 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 IL9RQ01113 521 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 GFPT1Q06210 699 aaPredicted RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 SURF1Q15526 300 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 KNOP1Q1ED39 458 aaKnown RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 KCNT1Q5JUK3 1230 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 TMEM215Q68D42 235 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 SLC23A3Q6PIS1 610 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 SMYD4Q8IYR2 804 aaPredicted RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 IQUBQ8NA54 791 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 TAS1R2Q8TE23 839 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 CYB5D2Q8WUJ1 264 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 SEMA4DQ92854 862 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 SYAP1Q96A49 352 aaPredicted RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 SMARCD1Q96GM5 515 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 TOE1Q96GM8 510 aaKnown RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 PAGE5Q96GU1 130 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 IRX2Q9BZI1 471 aaPredicted RBP7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 KCTD10Q9H3F6 313 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 IL37Q9NZH6 218 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 RASAL2Q9UJF2 1139 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 NAGPAQ9UK23 515 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 SLC6A14Q9UN76 642 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 BTBD3Q9Y2F9 522 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 STON1Q9Y6Q2 735 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 PCDH15Q96QU1 1955 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 KALRNO60229 2985 aa7.2□□□□□ -1.26
PRPF40B-214ENST00000551320 FAM170AA1A519 330 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 K7ELQ4 463 aaPredicted RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 CBX4O00257 560 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 AP5Z1O43299 807 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 OPHN1O60890 802 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 SERPINF2P08697 491 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 DGKGP49619 791 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 CSNK1EP49674 416 aaKnown RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 SMCPP49901 116 aaPredicted RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 PDE6CP51160 858 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 EPHA4P54764 986 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 SCAPQ12770 1279 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 LMAN2Q12907 356 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 GRIK2Q13002 908 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 TLR1Q15399 786 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 TRIP6Q15654 476 aaKnown RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 DUOXA1Q1HG43 343 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 C6orf118Q5T5N4 469 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 RESP18Q5W5W9 173 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 MRPL14Q6P1L8 145 aaKnown RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 STXBP4Q6ZWJ1 553 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 HTR3DQ70Z44 454 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 DENND1CQ8IV53 801 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 ZC3H3Q8IXZ2 948 aaKnown RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 HDDC3Q8N4P3 179 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 SETD7Q8WTS6 366 aaKnown RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 HNRNPLLQ8WVV9 542 aaKnown RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 SNX19Q92543 992 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 EDEM1Q92611 657 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 ERCC4Q92889 916 aaPredicted RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 EXOC4Q96A65 974 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 MYEOVQ96EZ4 313 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 CYFIP2Q96F07 1278 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 INSM2Q96T92 566 aaPredicted RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 PRDM16Q9HAZ2 1276 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 KIAA1586Q9HCI6 787 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 DMAC2Q9NW81 257 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 TBC1D14Q9P2M4 693 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 EVLQ9UI08 416 aaPredicted RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 EIF2B4Q9UI10 523 aaKnown RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 FNDC3AQ9Y2H6 1198 aaKnown RBP7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 HRH3Q9Y5N1 445 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 ACACAQ13085 2346 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 PLXNB3Q9ULL4 1909 aa7.19□□□□□ -1.26
PRPF40B-214ENST00000551320 CABIN1Q9Y6J0 2220 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 GOLGA6L7A0A1B0GV03 622 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 A0A1B0GVT2 93 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 SLC12A8A0AV02 714 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 FAM92AA1XBS5 289 aa7.18□□□□□ -1.26
PRPF40B-214ENST00000551320 MEI4A8MW99 385 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms