RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 C20orf27Q9GZN8 174 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 POPDC2Q9HBU9 364 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 DTLQ9NZJ0 730 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 CCDC22O60826 627 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 DGKIO75912 1065 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 DEUP1Q05D60 604 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 FASTKD1Q53R41 847 aaKnown RBP14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 NOL9Q5SY16 702 aaKnown RBP14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 C1orf146Q5VVC0 180 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 NXNQ6DKJ4 435 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 SUFUQ9UMX1 484 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 SPDYE5A6NIY4 337 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 PRR5-ARHGAP8B1AHC4 643 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 TM9SF1O15321 606 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 USP1O94782 785 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 USP17L7P0C7H9 530 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 ARHGAP8P85298 464 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 SLC25A3Q00325 362 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 SOX4Q06945 474 aaPredicted RBP14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 CYP4V2Q6ZWL3 525 aaPredicted RBP14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 ADGRF2Q8IZF7 708 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 SHKBP1Q8TBC3 707 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 SCYL1Q96KG9 808 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 MROH8Q9H579 483 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 RNPEPL1Q9HAU8 725 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 GJD2Q9UKL4 321 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 WASF2Q9Y6W5 498 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 ITM2AO43736 263 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 ATICP31939 592 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 EPHX2P34913 555 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 ITGA9Q13797 1035 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 DGKDQ16760 1214 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 HSP90AA5PQ58FG0 334 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 RNF135Q8IUD6 432 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 RELL1Q8IUW5 271 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 PPP4R1Q8TF05 950 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 FAM136AQ96C01 138 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 L3MBTL3Q96JM7 780 aaPredicted RBP14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 C16orf70Q9BSU1 422 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 LRMDAQ9H2I8 198 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 DDIT4Q9NX09 232 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 SYBUQ9NX95 663 aa14.09□□□□□ -0.15
PRPF40B-209ENST00000548825 SMIM28A0A1B0GU29 152 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 E9PBE3 544 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 C2CD2LO14523 706 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 KLHL41O60662 606 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 PEX11AO75192 247 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 STK10O94804 968 aaKnown RBP14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 L1CAMP32004 1257 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 SLC26A2P50443 739 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 TKTL1P51854 596 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 SARNPP82979 210 aaKnown RBP14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 CDK16Q00536 496 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 USP4Q13107 963 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 PDK2Q15119 407 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 SLC45A4Q5BKX6 768 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 WLSQ5T9L3 541 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 TAPT1Q6NXT6 567 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 NOTUMQ6P988 496 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 SLC27A1Q6PCB7 646 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 DCLK2Q8N568 766 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 TEX9Q8N6V9 391 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 RNF148Q8N7C7 305 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 ALKBH8Q96BT7 664 aaKnown RBP14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 P2RY11Q96G91 374 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 DDX50Q9BQ39 737 aaKnown RBP14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 KRT82Q9NSB4 513 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 TAS2R1Q9NYW7 299 aa14.08□□□□□ -0.15
PRPF40B-209ENST00000548825 DFFAO00273 331 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 EEF2KO00418 725 aaKnown RBP14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 TXNDC9O14530 226 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 CXCL11O14625 94 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 CFLARO15519 480 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 ADCY6O43306 1168 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 VAV1P15498 845 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 C9orf57Q5W0N0 161 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 BZW1Q7L1Q6 419 aaKnown RBP14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 TREML1Q86YW5 311 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 LOXHD1Q8IVV2 1947 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 GSDMBQ8TAX9 411 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 CDKL2Q92772 493 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 NAF1Q96HR8 494 aaKnown RBP14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 AGAP2Q99490 1192 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 PNPOQ9NVS9 261 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 BTBD19C9JJ37 291 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 FAM72CH0Y354 149 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 CHADO15335 359 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 CALB2P22676 271 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 HOXA11P31270 313 aaPredicted RBP14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 MRPS5P82675 430 aaKnown RBP14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 BST2Q10589 180 aaKnown RBP14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 FAM72AQ5TYM5 149 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 FAM72DQ6L9T8 149 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 FAM72BQ86X60 149 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 STK32AQ8WU08 396 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 ATP2A3Q93084 1043 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 BTBD10Q9BSF8 475 aa14.08□□□□□ -0.16
PRPF40B-209ENST00000548825 UBTFL6P0CB48 400 aaPredicted RBP14.07□□□□□ -0.16
PRPF40B-209ENST00000548825 CCNB1P14635 433 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms