RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CYTH4Q9UIA0 394 aa10.15□□□□□ -0.78
TNFRSF1A-214ENST00000543048 STOML2Q9UJZ1 356 aa10.15□□□□□ -0.78
TNFRSF1A-214ENST00000543048 AJAP1Q9UKB5 411 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF1A-214ENST00000543048 GMEB2Q9UKD1 530 aa10.15□□□□□ -0.78
TNFRSF1A-214ENST00000543048 GOLGA8CPA6NN73 597 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SGK1O00141 431 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 LATS1O95835 1130 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 RETP07949 1114 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NCAM1P13591 858 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TBX4P57082 545 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 RING1Q06587 406 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 DRAP1Q14919 205 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 KRT31Q15323 416 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 LPAL2Q16609 132 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 STX1AQ16623 288 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 MPPE1Q53F39 396 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 USP39Q53GS9 565 aaKnown RBP10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ADGRF1Q5T601 910 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FYB2Q5VWT5 728 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 KIAA2013Q8IYS2 634 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZNF513Q8N8E2 541 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ANKRD20A12PQ8NF67 263 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 BHMTQ93088 406 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FAM149B1Q96BN6 582 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 KCTD12Q96CX2 325 aaKnown RBP10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TMA16Q96EY4 203 aaKnown RBP10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PPP1R13BQ96KQ4 1090 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NOX5Q96PH1 765 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TRIM62Q9BVG3 475 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 LSM14BQ9BX40 385 aaKnown RBP10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NAA15Q9BXJ9 866 aaKnown RBP10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 STK33Q9BYT3 514 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLC2A11Q9BYW1 496 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 IRX2Q9BZI1 471 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PLCB1Q9NQ66 1216 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TAB2Q9NYJ8 693 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 HCN2Q9UL51 889 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NAALADL1Q9UQQ1 740 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLC27A6Q9Y2P4 619 aa10.14□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CEP250Q9BV73 2442 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 LRRC10BA6NIK2 292 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PRRT4C9JH25 899 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 E5RJQ4 531 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CAPN9O14815 690 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PAPSS1O43252 624 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 MSI1O43347 362 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TIMM44O43615 452 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ACSL4O60488 711 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TSPAN3O60637 253 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 LRP3O75074 770 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ADAM23O75077 832 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 IGLV3-27P01718 113 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 HNRNPLP14866 589 aaKnown RBP eCLIP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 UCHL3P15374 230 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CDK11BP21127 795 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NTSR1P30989 418 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLC11A2P49281 568 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZNF445P59923 1031 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 YWHAZP63104 245 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PDCLQ13371 301 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 RAPGEF1Q13905 1077 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 E2F5Q15329 346 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 EFHC1Q5JVL4 640 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FKBP15Q5T1M5 1219 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NUGGCQ68CJ6 796 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CAVIN1Q6NZI2 390 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 C11orf57Q6ZUT1 292 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TOGARAM2Q6ZUX3 1019 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLC47A2Q86VL8 602 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 RASSF3Q86WH2 238 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FAM160A2Q8N612 972 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 UCMAQ8WVF2 138 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 P2RY11Q96G91 374 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PIWIL1Q96J94 861 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 LOXL4Q96JB6 756 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZC3H10Q96K80 434 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SERPINB11Q96P15 392 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 DDX50Q9BQ39 737 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ANP32EQ9BTT0 268 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PDCL3Q9H2J4 239 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 POPDC2Q9HBU9 364 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZDHHC4Q9NPG8 344 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NPDC1Q9NQX5 325 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 LIMA1Q9UHB6 759 aaKnown RBP10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TLR6Q9Y2C9 796 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 DMXL1Q9Y485 3027 aa10.13□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CKAP5Q14008 2032 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 GFRA2O00451 464 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NPC1O15118 1278 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZBTB24O43167 697 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 IRAK2O43187 625 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 RHOBTB1O94844 696 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 GLI1P08151 1106 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PNMA6AP0CW24 399 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TGM1P22735 817 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 WASP42768 502 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 COPB1P53618 953 aaKnown RBP10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 MYL5Q02045 173 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NNTQ13423 1086 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms