RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 HOXA4Q00056 320 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-208ENST00000520746 TNFAIP2Q03169 654 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 GPS1Q13098 491 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 MRNIPQ6NTE8 343 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 MIS18BP1Q6P0N0 1132 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 Q6ZWC4 215 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 MEPCEQ7L2J0 689 aaKnown RBP4.28□□□□□ -1.72
HDAC2-208ENST00000520746 MYLK4Q86YV6 388 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-208ENST00000520746 FSTL5Q8N475 847 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-208ENST00000520746 PRSS3P2Q8NHM4 247 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 RP9Q8TA86 221 aaKnown RBP4.28□□□□□ -1.72
HDAC2-208ENST00000520746 C18orf8Q96DM3 657 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 TMEM41AQ96HV5 264 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 CRB3Q9BUF7 120 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 TTLL2Q9BWV7 592 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 FSD1LQ9BXM9 530 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 STK33Q9BYT3 514 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 KLHL13Q9P2N7 655 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 VPS51Q9UID3 782 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 RIMKLBQ9ULI2 386 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 RICTORQ6R327 1708 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 PREX1Q8TCU6 1659 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 TROQ12816 1431 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-208ENST00000520746 EEA1Q15075 1411 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 NCOA1Q15788 1441 aa4.28□□□□□ -1.72
HDAC2-208ENST00000520746 SAMD9Q5K651 1589 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 CES2O00748 559 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 PMPCBO75439 489 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 TSPY4P0CV99 314 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 TSPY10P0CW01 314 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 CD19P15391 556 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 PECAM1P16284 738 aaPredicted RBP4.27□□□□□ -1.73
HDAC2-208ENST00000520746 EGR1P18146 543 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 RBL1P28749 1068 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 GKP32189 559 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 E2F1Q01094 437 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 RAB30Q15771 203 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 MAPKAPK3Q16644 382 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 CYP1B1Q16678 543 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 TBC1D25Q3MII6 688 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 ARHGAP15Q53QZ3 475 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 TMTC4Q5T4D3 741 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 L1TD1Q5T7N2 865 aaKnown RBP4.27□□□□□ -1.73
HDAC2-208ENST00000520746 PGBD2Q6P3X8 592 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 TRIM72Q6ZMU5 477 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 SIRT6Q8N6T7 355 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 ZNF527Q8NB42 609 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 ABHD11Q8NFV4 315 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 PIGOQ8TEQ8 1089 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 IPO4Q8TEX9 1081 aaKnown RBP4.27□□□□□ -1.73
HDAC2-208ENST00000520746 ABHD5Q8WTS1 349 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 POF1BQ8WVV4 589 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 RSPRY1Q96DX4 576 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 ZDHHC12Q96GR4 267 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 PRR25Q96S07 402 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 WWOXQ9NZC7 414 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 NKX1-2Q9UD57 310 aaPredicted RBP4.27□□□□□ -1.73
HDAC2-208ENST00000520746 STEAP1Q9UHE8 339 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 SLC27A6Q9Y2P4 619 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 CAMSAP1Q5T5Y3 1602 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 CCNB3Q8WWL7 1395 aa4.27□□□□□ -1.73
HDAC2-208ENST00000520746 A0A087WV62 115 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 PIP5K1BO14986 540 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 ZSCAN9O15535 394 aaPredicted RBP4.26□□□□□ -1.73
HDAC2-208ENST00000520746 FFAR2O15552 330 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 PDE8BO95263 885 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 FGBP02675 491 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 NPSP0C0P6 89 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 SRGAP2BP0DMP2 458 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 ARP10275 920 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 CREB1P16220 341 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 MST1P26927 711 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 SUMO2P61956 95 aaKnown RBP4.26□□□□□ -1.73
HDAC2-208ENST00000520746 FHL3Q13643 280 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 SLC5A9Q2M3M2 681 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 ABLIM2Q6H8Q1 611 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 KIAA1161Q6NSJ0 714 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 MRPL10Q7Z7H8 261 aaKnown RBP4.26□□□□□ -1.73
HDAC2-208ENST00000520746 METTL25Q8N6Q8 603 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 ENAHQ8N8S7 591 aaPredicted RBP4.26□□□□□ -1.73
HDAC2-208ENST00000520746 SMRP1Q8NCR6 262 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 MBD3L2Q8NHZ7 208 aaPredicted RBP4.26□□□□□ -1.73
HDAC2-208ENST00000520746 NSMCE1Q8WV22 266 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 GRAMD1AQ96CP6 724 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 VCPIP1Q96JH7 1222 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 MARK4Q96L34 752 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 ARPC5LQ9BPX5 153 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 NECTIN3Q9NQS3 549 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 GABRQQ9UN88 632 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 ADAMTS5Q9UNA0 930 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 STRCQ7RTU9 1775 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 TTC3P53804 2025 aa4.26□□□□□ -1.73
HDAC2-208ENST00000520746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.26□□□□□ -1.73
HDAC2-208ENST00000520746 ZNF644Q9H582 1327 aaPredicted RBP4.25□□□□□ -1.73
HDAC2-208ENST00000520746 IQSEC2Q5JU85 1478 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 MLH3Q9UHC1 1453 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 KIF14Q15058 1648 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 LTBP4Q8N2S1 1624 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 GOLGA6L3A6NEY3 463 aa4.25□□□□□ -1.73
HDAC2-208ENST00000520746 SPRY2O43597 315 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms