RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 RBM20Q5T481 1227 aaKnown RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZNF618Q5T7W0 954 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 WLSQ5T9L3 541 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 NUGGCQ68CJ6 796 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 OVCH2Q7RTZ1 564 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 C11orf96Q7Z7L8 435 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 PCGF5Q86SE9 256 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 KIAA0319LQ8IZA0 1049 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 MAB21L3Q8N8X9 362 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 PLBD2Q8NHP8 589 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 KIAA1524Q8TCG1 905 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 NEK9Q8TD19 979 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 TBC1D5Q92609 795 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 GSDMAQ96QA5 445 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 LRFN3Q9BTN0 628 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 ACTRT3Q9BYD9 372 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 TRIM54Q9BYV2 358 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 INO80BQ9C086 356 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 TTYH3Q9C0H2 523 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 VCX3BQ9H321 246 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 PRKRIP1Q9H875 184 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 COMMD8Q9NX08 183 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZMAT5Q9UDW3 170 aaKnown RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 STAP2Q9UGK3 403 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 PCSK1NQ9UHG2 260 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 LCMT1Q9UIC8 334 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 OGDHLQ9ULD0 1010 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 PAIP2BQ9ULR5 123 aaKnown RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 AGAP1Q9UPQ3 857 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 TMED5Q9Y3A6 229 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 N6AMT1Q9Y5N5 214 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 SCINQ9Y6U3 715 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 NPHP4O75161 1426 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 ADAMTS13Q76LX8 1427 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 SYNMO15061 1565 aa5.03□□□□□ -1.6
HMGB3P13-201ENST00000511263 USP19O94966 1318 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 STAM2O75886 525 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 URI1O94763 535 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 INMTO95050 263 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 PYGLP06737 847 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 BRAFP15056 766 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 BMP5P22003 454 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 CCNCP24863 283 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 SLC8A1P32418 973 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 RARRES1P49788 294 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZNF131P52739 623 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 ARPC4P59998 168 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 MC2RQ01718 297 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 NUCB1Q02818 461 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 COL10A1Q03692 680 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 KRT17Q04695 432 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 NSUN2Q08J23 767 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 FOXI1Q12951 378 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 CUL4BQ13620 913 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 CNN3Q15417 329 aaKnown RBP5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 INSCQ1MX18 579 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 Q4G0T1 1027 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 CCDC122Q5T0U0 273 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 RNF220Q5VTB9 566 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 KIAA0895LQ68EN5 471 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 ISM2Q6H9L7 571 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 TMEM108Q6UXF1 575 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 CHST15Q7LFX5 561 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 TTC30AQ86WT1 665 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 MPP5Q8N3R9 675 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 GABPB2Q8TAK5 448 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 PARD3BQ8TEW8 1205 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 LRTOMTQ8WZ04 291 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 ARHGAP45Q92619 1136 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 FKBP10Q96AY3 582 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 LRRC45Q96CN5 670 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZBTB10Q96DT7 871 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 NAF1Q96HR8 494 aaKnown RBP5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 MRGPRX1Q96LB2 322 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 NAP1L4Q99733 375 aaKnown RBP5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 SLC39A3Q9BRY0 314 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 AMBRA1Q9C0C7 1298 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZCWPW1Q9H0M4 648 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 TAOK3Q9H2K8 898 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 BHMT2Q9H2M3 363 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 ATP6V0A4Q9HBG4 840 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 TRMT13Q9NUP7 481 aaKnown RBP5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 TRMT1Q9NXH9 659 aaKnown RBP5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 SEL1LQ9UBV2 794 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 ACAD8Q9UKU7 415 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 TMCC3Q9ULS5 477 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 SH2B3Q9UQQ2 575 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 DLC1Q96QB1 1528 aa5.02□□□□□ -1.61
HMGB3P13-201ENST00000511263 CLTCL1P53675 1640 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 TTC21AQ8NDW8 1320 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 SPHKAPQ2M3C7 1700 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 KIAA1210Q9ULL0 1709 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 SLC16A3O15427 465 aaKnown RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 TOM1O60784 492 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 ATP6V1G1O75348 118 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZNF189O75820 626 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 DNAJB5O75953 348 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 MTA2O94776 668 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 SLU7O95391 586 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms