RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 VEGFAP15692 232 aaPredicted RBP6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 WDR5P61964 334 aaKnown RBP6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 TMEM119Q4V9L6 283 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 SYCE2Q6PIF2 218 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 CCDC174Q6PII3 467 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 C16orf89Q6UX73 402 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 KRT27Q7Z3Y8 459 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 OR4N4Q8N0Y3 316 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 C8orf58Q8NAV2 365 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 ADGRE3Q9BY15 652 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 CDCP1Q9H5V8 836 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 AGO4Q9HCK5 861 aaKnown RBP6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 PRDM8Q9NQV8 689 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 WDR97A6NE52 1622 aa6.75□□□□□ -1.33
UBE2D3-217ENST00000504211 FANCD2Q9BXW9 1451 aa6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 CD38P28907 300 aa6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 CHKAP35790 457 aa6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 CDK7P50613 346 aa6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 PNLIPRP1P54315 467 aa6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 SLC14A1Q13336 389 aa6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 PDCD2Q16342 344 aaPredicted RBP6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 ZNF66Q6ZN08 573 aa6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 SLC44A2Q8IWA5 706 aaPredicted RBP6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 FAR2Q96K12 515 aa6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 PABPC3Q9H361 631 aaKnown RBP6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 FLRT1Q9NZU1 646 aa6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 GRHPRQ9UBQ7 328 aa6.74□□□□□ -1.33
UBE2D3-217ENST00000504211 RAPGEF2Q9Y4G8 1499 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 hCG_1642624A0A1W2PR95 340 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 TMEM232C9JQI7 657 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 NKX2-8O15522 239 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 ACTL6BO94805 426 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 AKT1P31749 480 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 CBFBQ13951 182 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 AAK1Q2M2I8 961 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 BTBD16Q32M84 506 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 AWAT1Q58HT5 328 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 ZNF813Q6ZN06 617 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 MCRS1Q96EZ8 462 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 LTV1Q96GA3 475 aaPredicted RBP6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 SEMA4CQ9C0C4 833 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 CNTN6Q9UQ52 1028 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 ZBTB1Q9Y2K1 713 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 KIF21AQ7Z4S6 1674 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 FGD5Q6ZNL6 1462 aa6.73□□□□□ -1.33
UBE2D3-217ENST00000504211 NDUFS1P28331 727 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 GRK6P43250 576 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 FOXF2Q12947 444 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 GAB1Q13480 694 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 CNGA3Q16281 694 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 ATPAF1Q5TC12 328 aaPredicted RBP6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 NFRKBQ6P4R8 1299 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 RANBP10Q6VN20 620 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 NKAPQ8N5F7 415 aaKnown RBP6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 OTUD7AQ8TE49 926 aaPredicted RBP6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 TRAPPC12Q8WVT3 735 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 AKAP1Q92667 903 aaKnown RBP eCLIP6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 TMEM120AQ9BXJ8 343 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 MAFFQ9ULX9 164 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 VPS4AQ9UN37 437 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 PCDHB7Q9Y5E2 793 aa6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 SIRT4Q9Y6E7 314 aaPredicted RBP6.72□□□□□ -1.33
UBE2D3-217ENST00000504211 CUL7Q14999 1698 aa6.71□□□□□ -1.33
UBE2D3-217ENST00000504211 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 PRYO14603 147 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 LARGE1O95461 756 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 CYP2D6P10635 497 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 GYS1P13807 737 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 SFPQP23246 707 aaKnown RBP eCLIP6.71□□□□□ -1.343e-6■□□□□ 10.5
UBE2D3-217ENST00000504211 AP2B1P63010 937 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 SEC23BQ15437 767 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 TTC22Q5TAA0 569 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 SULT6B1Q6IMI4 303 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 KLHL17Q6TDP4 642 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 KYAT3Q6YP21 454 aaKnown RBP6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 RAB11FIP2Q7L804 512 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 LAS2Q8IYD9 372 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 MYCT1Q8N699 235 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 SCAMP5Q8TAC9 235 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 ASB12Q8WXK4 309 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 P2RY11Q96G91 374 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 DDX23Q9BUQ8 820 aaKnown RBP6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 DAPP1Q9UN19 280 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 TOPBP1Q92547 1522 aa6.71□□□□□ -1.34
UBE2D3-217ENST00000504211 CGB1A6NKQ9 187 aa6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 SLC38A8A6NNN8 435 aa6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 TTC34A8MYJ7 566 aa6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 KIF28PB7ZC32 967 aa6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 M0QYT0 321 aa6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 TUBB4AP04350 444 aa6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 CERS1P27544 350 aa6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 THBS4P35443 961 aa6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 HOXD12P35452 270 aa6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 TLE3Q04726 772 aa6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 SF3A3Q12874 501 aaKnown RBP eCLIP6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 GALNT16Q8N428 558 aa6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 TRMT61AQ96FX7 289 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-217ENST00000504211 C5orf34Q96MH7 638 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms