RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 SNRPAP09012 282 aaKnown RBP15.28■□□□□ 0.04
CHTOP-206ENST00000495554 TROVE2P10155 538 aaKnown RBP eCLIP15.28■□□□□ 0.04
CHTOP-206ENST00000495554 ETV4P43268 484 aa15.28■□□□□ 0.04
CHTOP-206ENST00000495554 FAM131BQ86XD5 332 aa15.28■□□□□ 0.04
CHTOP-206ENST00000495554 DEFB106AQ8N104 65 aa15.28■□□□□ 0.04
CHTOP-206ENST00000495554 TFB1MQ8WVM0 346 aaKnown RBP15.28■□□□□ 0.04
CHTOP-206ENST00000495554 FAM149B1Q96BN6 582 aa15.28■□□□□ 0.04
CHTOP-206ENST00000495554 MTG1Q9BT17 334 aaPredicted RBP15.28■□□□□ 0.04
CHTOP-206ENST00000495554 NOD2Q9HC29 1040 aa15.28■□□□□ 0.04
CHTOP-206ENST00000495554 CACNG4Q9UBN1 327 aa15.28■□□□□ 0.04
CHTOP-206ENST00000495554 BAIAP2L1Q9UHR4 511 aa15.28■□□□□ 0.04
CHTOP-206ENST00000495554 FZD10Q9ULW2 581 aa15.28■□□□□ 0.04
CHTOP-206ENST00000495554 ST3GAL5Q9UNP4 418 aa15.28■□□□□ 0.04
CHTOP-206ENST00000495554 CHRNA1P02708 482 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 GOT1P17174 413 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 AMPD1P23109 780 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 SULT1E1P49888 294 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 ADIGQ0VDE8 80 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 TRIM32Q13049 653 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 SEMA5AQ13591 1074 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 SPDYAQ5MJ70 313 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 ZNF534Q76KX8 674 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 SIGLEC10Q96LC7 697 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 OLFM3Q96PB7 478 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 EBNA1BP2Q99848 306 aaKnown RBP15.27■□□□□ 0.04
CHTOP-206ENST00000495554 C12orf65Q9H3J6 166 aaKnown RBP15.27■□□□□ 0.04
CHTOP-206ENST00000495554 PLAC1Q9HBJ0 212 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 ZNF232Q9UNY5 417 aa15.27■□□□□ 0.04
CHTOP-206ENST00000495554 TRIM49D1C9J1S8 452 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 C2CD2LO14523 706 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 KPNA6O60684 536 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 DAB1O75553 588 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 DGKIO75912 1065 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 NPR3P17342 541 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 PAX3P23760 479 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 TM4SF4P48230 202 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 DCAF6Q58WW2 860 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 ZNF280DQ6N043 979 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 UNC5AQ6ZN44 842 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 PAQR9Q6ZVX9 377 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 HACE1Q8IYU2 909 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 KIF2BQ8N4N8 673 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 GSDMBQ8TAX9 411 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 HTR3CQ8WXA8 447 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 KCTD13Q8WZ19 329 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 FAM111AQ96PZ2 611 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 IQCGQ9H095 443 aaKnown RBP15.27■□□□□ 0.03
CHTOP-206ENST00000495554 MIOSQ9NXC5 875 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 MAD1L1Q9Y6D9 718 aa15.27■□□□□ 0.03
CHTOP-206ENST00000495554 COPEO14579 308 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 TPD52L2O43399 206 aaKnown RBP15.26■□□□□ 0.03
CHTOP-206ENST00000495554 CA12O43570 354 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 NOS2P35228 1153 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 MRPS5P82675 430 aaKnown RBP15.26■□□□□ 0.03
CHTOP-206ENST00000495554 CDK16Q00536 496 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 CAP1Q01518 475 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 PYROXD2Q8N2H3 581 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 NT5C3BQ969T7 300 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 UPF3AQ9H1J1 476 aaKnown RBP15.26■□□□□ 0.03
CHTOP-206ENST00000495554 NPHS2Q9NP85 383 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 TRPV2Q9Y5S1 764 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 A0A0A0MRY4 1105 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 CXorf49A8MYA2 514 aaPredicted RBP15.26■□□□□ 0.03
CHTOP-206ENST00000495554 CYB561D2O14569 222 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 KRT38O76015 456 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 KRT16P08779 473 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 PTPN1P18031 435 aaKnown RBP15.26■□□□□ 0.03
CHTOP-206ENST00000495554 MAP2K2P36507 400 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 KIAA0319Q5VV43 1072 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 MTBPQ96DY7 904 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 SPATA13Q96N96 652 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 LRRC4Q9HBW1 653 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 ARHGEF4Q9NR80 690 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 STAP1Q9ULZ2 295 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 TLL2Q9Y6L7 1015 aa15.26■□□□□ 0.03
CHTOP-206ENST00000495554 GABRDO14764 452 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 BEST1O76090 585 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 NEFHP12036 1026 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 FDFT1P37268 417 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 ANKRD20A2Q5SQ80 823 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 MFSD4BQ5TF39 518 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 ANKRD20A1Q5TYW2 823 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 ANKRD20A3Q5VUR7 823 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 WSCD1Q658N2 575 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 CYS1Q717R9 158 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 NLRP9Q7RTR0 991 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 CCDC33Q8N5R6 958 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 PTPRN2Q92932 1015 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 SRPK1Q96SB4 655 aaKnown RBP15.25■□□□□ 0.03
CHTOP-206ENST00000495554 FERMT1Q9BQL6 677 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 TSSK1BQ9BXA7 367 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 TRIM55Q9BYV6 548 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 TSPYL2Q9H2G4 693 aaPredicted RBP15.25■□□□□ 0.03
CHTOP-206ENST00000495554 FAM105AQ9NUU6 356 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 TRIM33Q9UPN9 1127 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 FAM159BA6NKW6 160 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 H3BRJ5 948 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 STK10O94804 968 aaKnown RBP15.25■□□□□ 0.03
CHTOP-206ENST00000495554 CTSHP09668 335 aa15.25■□□□□ 0.03
CHTOP-206ENST00000495554 RARBP10826 455 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms