RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 NIF3L1Q9GZT8 377 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 BTBD1Q9H0C5 482 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 C6orf106Q9H6K1 298 aaPredicted RBP14.92□□□□□ -0.02
VARS-228ENST00000495010 CLEC4EQ9ULY5 219 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 BTBD3Q9Y2F9 522 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 ANKRD6Q9Y2G4 727 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 USP3Q9Y6I4 520 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 PTPRBP23467 1997 aa14.92□□□□□ -0.02
VARS-228ENST00000495010 DKK1O94907 266 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 FSBPO95073 299 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 SEMA4FO95754 770 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 DNTTP04053 509 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 KRT13P13646 458 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 ACSL1P33121 698 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 GRIA4P48058 902 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 HARS2P49590 506 aaKnown RBP14.91□□□□□ -0.02
VARS-228ENST00000495010 YWHAGP61981 247 aaKnown RBP eCLIP14.91□□□□□ -0.02
VARS-228ENST00000495010 CAMK2GQ13555 558 aaPredicted RBP14.91□□□□□ -0.02
VARS-228ENST00000495010 ZNF394Q53GI3 561 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 MARCH9Q86YJ5 346 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 GRAMD1CQ8IYS0 662 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 WFIKKN2Q8TEU8 576 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 TMEM174Q8WUU8 243 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 IGSF8Q969P0 613 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 ARID3AQ99856 593 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 MMRN2Q9H8L6 949 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 FBRSQ9HAH7 460 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 TM9SF3Q9HD45 589 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 OSGEPQ9NPF4 335 aa14.91□□□□□ -0.02
VARS-228ENST00000495010 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.91□□□□□ -0.02
VARS-228ENST00000495010 FAM149AA5PLN7 773 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 KCNK3O14649 394 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 TSPAN3O60637 253 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 PDIA4P13667 645 aaKnown RBP14.9□□□□□ -0.02
VARS-228ENST00000495010 GCLMP48507 274 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 BCAT1P54687 386 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 C21orf59P57076 290 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 FOXD4L6Q3SYB3 417 aaPredicted RBP14.9□□□□□ -0.02
VARS-228ENST00000495010 TTC31Q49AM3 519 aaPredicted RBP14.9□□□□□ -0.02
VARS-228ENST00000495010 KMT5BQ4FZB7 885 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 FOXD4L5Q5VV16 416 aaPredicted RBP14.9□□□□□ -0.02
VARS-228ENST00000495010 TMEM215Q68D42 235 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 FOXD4L3Q6VB84 417 aaPredicted RBP14.9□□□□□ -0.02
VARS-228ENST00000495010 CHST9Q7L1S5 443 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 SCUBE3Q8IX30 993 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 KIAA0895Q8NCT3 520 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 CYB5D2Q8WUJ1 264 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 FOXD4L4Q8WXT5 416 aaPredicted RBP14.9□□□□□ -0.02
VARS-228ENST00000495010 DCBLD2Q96PD2 775 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 KCTD10Q9H3F6 313 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 APOBEC3GQ9HC16 384 aaKnown RBP14.9□□□□□ -0.02
VARS-228ENST00000495010 OLA1Q9NTK5 396 aaKnown RBP14.9□□□□□ -0.02
VARS-228ENST00000495010 FTSJ1Q9UET6 329 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 SERTAD1Q9UHV2 236 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 NCKAP1Q9Y2A7 1128 aa14.9□□□□□ -0.02
VARS-228ENST00000495010 KLRC4O43908 158 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 PCDHGA12O60330 932 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 DFNA5O60443 496 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 CD27P26842 260 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 ABCG1P45844 678 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 ZNF445P59923 1031 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 ZBTB16Q05516 673 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 RESP18Q5W5W9 173 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 DHRS13Q6UX07 377 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 INTS8Q75QN2 995 aaKnown RBP14.89□□□□□ -0.03
VARS-228ENST00000495010 TTC39CQ8N584 583 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 ZNF366Q8N895 744 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 RBBP8NLQ8NC74 664 aaPredicted RBP14.89□□□□□ -0.03
VARS-228ENST00000495010 TAS1R2Q8TE23 839 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 GANCQ8TET4 914 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 RNF139Q8WU17 664 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 GOLGA1Q92805 767 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 SKA1Q96BD8 255 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 BIRC7Q96CA5 298 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 TMA16Q96EY4 203 aaKnown RBP14.89□□□□□ -0.03
VARS-228ENST00000495010 BBC3Q96PG8 261 aaPredicted RBP14.89□□□□□ -0.03
VARS-228ENST00000495010 UBXN6Q9BZV1 441 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 SGK2Q9HBY8 427 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 SUN2Q9UH99 717 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 PCDHA7Q9UN72 937 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 SLCO1B1Q9Y6L6 691 aa14.89□□□□□ -0.03
VARS-228ENST00000495010 CKAP5Q14008 2032 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 A0A087WV48 116 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 E9PAM4 449 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 H0Y8X5 98 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 MAPK13O15264 365 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 ZBED1O96006 694 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 ATP5BP06576 529 aaKnown RBP14.88□□□□□ -0.03
VARS-228ENST00000495010 SLFN14P0C7P3 912 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 TRIM49P0CI25 452 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 TRIM49CP0CI26 452 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 HOXD9P28356 352 aaPredicted RBP14.88□□□□□ -0.03
VARS-228ENST00000495010 HLA-FP30511 346 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 HNF1BP35680 557 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 TKTL1P51854 596 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 RPS14P62263 151 aaKnown RBP14.88□□□□□ -0.03
VARS-228ENST00000495010 IL9RQ01113 521 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 PDE4CQ08493 712 aa14.88□□□□□ -0.03
VARS-228ENST00000495010 SFSWAPQ12872 951 aaKnown RBP14.88□□□□□ -0.03
VARS-228ENST00000495010 SMAD1Q15797 465 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms