RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 ZNHIT2Q9UHR6 403 aa4.49□□□□□ -1.69
CLK1-213ENST00000492793 GTF2A1LQ9UNN4 478 aa4.49□□□□□ -1.69
CLK1-213ENST00000492793 ENTPD2Q9Y5L3 495 aa4.49□□□□□ -1.69
CLK1-213ENST00000492793 HEMK1Q9Y5R4 338 aaPredicted RBP4.49□□□□□ -1.69
CLK1-213ENST00000492793 WNT6Q9Y6F9 365 aa4.49□□□□□ -1.69
CLK1-213ENST00000492793 SLC38A8A6NNN8 435 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 B9A039 149 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 M0QZQ0 153 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 MT-CO3P00414 261 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 CNTFP26441 200 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 ITPKBP27987 946 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 PTH2RP49190 550 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 VPS41P49754 854 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 TGFB2P61812 414 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 KCNB1Q14721 858 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 CNGA3Q16281 694 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 FAM187BQ17R55 369 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 AAK1Q2M2I8 961 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 TMEM119Q4V9L6 283 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 WDR93Q6P2C0 686 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 C16orf89Q6UX73 402 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 RINLQ6ZS11 566 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 SLC16A11Q8NCK7 471 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 SIMC1Q8NDZ2 872 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 OR52L2PQ8NGH6 319 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 CEP70Q8NHQ1 597 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 NPIPB3Q92617 1050 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 COG8Q96MW5 612 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 SNX18Q96RF0 628 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 DDX23Q9BUQ8 820 aaKnown RBP4.48□□□□□ -1.69
CLK1-213ENST00000492793 ELOVL1Q9BW60 279 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 ABHD10Q9NUJ1 306 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 ARL8BQ9NVJ2 186 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 FEM1BQ9UK73 627 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 PCDHA10Q9Y5I2 948 aa4.48□□□□□ -1.69
CLK1-213ENST00000492793 TARM1B6A8C7 271 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 UBE2Q2LH0YL09 131 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 CYR61O00622 381 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 ZNF213O14771 459 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 APEHP13798 732 aaKnown RBP4.47□□□□□ -1.69
CLK1-213ENST00000492793 MATN1P21941 496 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 PAX3P23760 479 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 SLC8A1P32418 973 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 ACVRL1P37023 503 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 PCP4P48539 62 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 ACTR2P61160 394 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 WDR5P61964 334 aaKnown RBP4.47□□□□□ -1.69
CLK1-213ENST00000492793 RBM6P78332 1123 aaKnown RBP4.47□□□□□ -1.69
CLK1-213ENST00000492793 CFHR3Q02985 330 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 DPTQ07507 201 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 SLC12A1Q13621 1099 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 TRIM60Q495X7 471 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 CERKLQ49MI3 558 aaPredicted RBP4.47□□□□□ -1.69
CLK1-213ENST00000492793 TTC22Q5TAA0 569 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 SUMO4Q6EEV6 95 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 VSTM1Q6UX27 236 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 BCDIN3DQ7Z5W3 292 aaKnown RBP4.47□□□□□ -1.69
CLK1-213ENST00000492793 TMEM57Q8N5G2 664 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 PNLDC1Q8NA58 520 aaKnown RBP4.47□□□□□ -1.69
CLK1-213ENST00000492793 THAP4Q8WY91 577 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 AKAP1Q92667 903 aaKnown RBP eCLIP4.47□□□□□ -1.69
CLK1-213ENST00000492793 EDC3Q96F86 508 aaKnown RBP4.47□□□□□ -1.69
CLK1-213ENST00000492793 UBXN10Q96LJ8 280 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 FYTTD1Q96QD9 318 aaKnown RBP4.47□□□□□ -1.69
CLK1-213ENST00000492793 PAAF1Q9BRP4 392 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 THAP7Q9BT49 309 aaPredicted RBP4.47□□□□□ -1.69
CLK1-213ENST00000492793 PRDM16Q9HAZ2 1276 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 RIC8AQ9NPQ8 531 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 ZBTB1Q9Y2K1 713 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 RRP7AQ9Y3A4 280 aaKnown RBP4.47□□□□□ -1.69
CLK1-213ENST00000492793 INSL6Q9Y581 213 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 DMRT1Q9Y5R6 373 aa4.47□□□□□ -1.69
CLK1-213ENST00000492793 LOC105369274A0A096LPK9 316 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 LOC102723532A0A0G2JNH3 316 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 RRN3P2A6NIE6 340 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 NKX2-8O15522 239 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 FAM155BO75949 473 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 ALDOAP04075 364 aaKnown RBP4.46□□□□□ -1.7
CLK1-213ENST00000492793 PYGLP06737 847 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 DUSP1P28562 367 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 AGTR2P50052 363 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 SOX10P56693 466 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 FAM3BP58499 235 aaPredicted RBP4.46□□□□□ -1.7
CLK1-213ENST00000492793 TAS2R50P59544 299 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 RPL15P61313 204 aaKnown RBP4.46□□□□□ -1.7
CLK1-213ENST00000492793 PFKFB3Q16875 520 aaPredicted RBP4.46□□□□□ -1.7
CLK1-213ENST00000492793 TBRG1Q3YBR2 411 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 LRRC24Q50LG9 513 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 AWAT1Q58HT5 328 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 FBXO47Q5MNV8 452 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 STRIP1Q5VSL9 837 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 DGAT2L7PQ6IED9 249 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 OR4N4Q8N0Y3 316 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 AMER2Q8N7J2 671 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 FSIP1Q8NA03 581 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 SRFBP1Q8NEF9 429 aaKnown RBP4.46□□□□□ -1.7
CLK1-213ENST00000492793 SPPL3Q8TCT6 385 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 ADAMTS18Q8TE60 1221 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 GLMPQ8WWB7 406 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 NAP1L4Q99733 375 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms