RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	CLCN1	P35523	988 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	TIE1	P35590	1138 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	STAT1	P42224	750 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	DAOA	P59103	153 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	PDCL	Q13371	301 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	CCDC6	Q16204	474 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	PKDCC	Q504Y2	493 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	PPM1J	Q5JR12	505 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	EMC10	Q5UCC4	262 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	GRAMD4	Q6IC98	578 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	TRMT11	Q7Z4G4	463 aa	Known RBP	13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	FAM71A	Q8IYT1	594 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	SLC35F5	Q8WV83	523 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	HSFY1	Q96LI6	401 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	POLM	Q9NP87	494 aa	Predicted RBP	13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	MARCH2	Q9P0N8	246 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	WDR35	Q9P2L0	1181 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	SIK3	Q9Y2K2	1263 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	PI4KA	P42356	2102 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	CHD8	Q9HCK8	2581 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	YJEFN3	A6XGL0	299 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507		E7ENQ6	273 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	STC2	O76061	302 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	LTF	P02788	710 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	NCAM1	P13591	858 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	CYP11B1	P15538	503 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	SOX5	P35711	763 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	GPD2	P43304	727 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	FANCC	Q00597	558 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	CKAP5	Q14008	2032 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	ANO4	Q32M45	955 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	MAP7D1	Q3KQU3	841 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	SPDYC	Q5MJ68	293 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	C10orf76	Q5T2E6	689 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	STPG1	Q5TH74	334 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	BSPRY	Q5W0U4	402 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	OR6B2	Q6IFH4	312 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	TCEAL6	Q6IPX3	200 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	LRSAM1	Q6UWE0	723 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	SCUBE3	Q8IX30	993 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	TCEAL3	Q969E4	200 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	PPP1R13B	Q96KQ4	1090 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	XPO6	Q96QU8	1125 aa	Known RBP	13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	ERGIC2	Q96RQ1	377 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	NAA15	Q9BXJ9	866 aa	Known RBP	13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	SMOC1	Q9H4F8	434 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	RTN4	Q9NQC3	1192 aa	Known RBP	13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	ABCC13	Q9NSE7	274 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	OLA1	Q9NTK5	396 aa	Known RBP	13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	SFMBT1	Q9UHJ3	866 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	FBXO10	Q9UK96	956 aa		13.26	□□□□□ -0.29
FDPS-204	ENST00000461507	CACNA1B	Q00975	2339 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507		A0A1W2PQF6	199 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	TCRBV21S2A2	A0A5A6	115 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	TBC1D3B	A6NDS4	549 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	NEDD8-MDP1	E9PL57	170 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	TRIM24	O15164	1050 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	SART1	O43290	800 aa	Known RBP	13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	PENK	P01210	267 aa	Predicted RBP	13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	KLKB1	P03952	638 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	MME	P08473	750 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	CISD3	P0C7P0	127 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	TYR	P14679	529 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	GBP1	P32455	592 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	UBASH3A	P57075	661 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	SNX16	P57768	344 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	CREB5	Q02930	508 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	IL31	Q6EBC2	164 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	PM20D1	Q6GTS8	502 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	DPY19L2P1	Q6NXN4	242 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	NUDT18	Q6ZVK8	323 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	BHLHA9	Q7RTU4	235 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	APTX	Q7Z2E3	356 aa	Known RBP	13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	NOP9	Q86U38	636 aa	Known RBP	13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	FMNL3	Q8IVF7	1028 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	FAM217A	Q8IXS0	508 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	NAT16	Q8N8M0	369 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	TMEM35B	Q8NCS4	154 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	MSANTD4	Q8NCY6	345 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	SLC20A1	Q8WUM9	679 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	P2RY11	Q96G91	374 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	SPACA7	Q96KW9	195 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	GABRG3	Q99928	467 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	BBS2	Q9BXC9	721 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	DNAJC17	Q9NVM6	304 aa	Known RBP	13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	EVL	Q9UI08	416 aa	Predicted RBP	13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	CYTH4	Q9UIA0	394 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	PCDHGC3	Q9UN70	934 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	ZNF510	Q9Y2H8	683 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	DAAM1	Q9Y4D1	1078 aa		13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	MAP1B	P46821	2468 aa	Known RBP	13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	MUC22	E2RYF6	1773 aa	Predicted RBP	13.25	□□□□□ -0.29
FDPS-204	ENST00000461507	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	PCDH15	Q96QU1	1955 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	LNP1	A1A4G5	178 aa		13.24	□□□□□ -0.29
FDPS-204	ENST00000461507	LRRC10B	A6NIK2	292 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms