RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PRR11Q96HE9 360 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 KAZALD1Q96I82 304 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 SCLT1Q96NL6 688 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 ASB2Q96Q27 587 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 ADGRE3Q9BY15 652 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 SCAF8Q9UPN6 1271 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 PCDHB2Q9Y5E7 798 aa4.21□□□□□ -1.74
TRAPPC13-204ENST00000438419 CCDC189A1A4V9 331 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 TTC34A8MYJ7 566 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 TMEM232C9JQI7 657 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 CLIC1O00299 241 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 FYB1O15117 783 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 RPP40O75818 363 aaKnown RBP4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 RNF8O76064 485 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 LARGE1O95461 756 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 CER1O95813 267 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 MBPP02686 304 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 ALADP13716 330 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 AP2B1P63010 937 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 MRPS21P82921 87 aaKnown RBP4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 CNGA3Q16281 694 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 HSP90AB4PQ58FF6 505 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 LIN54Q6MZP7 749 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 ZNF66Q6ZN08 573 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 SLC44A2Q8IWA5 706 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 SRRM1Q8IYB3 904 aaKnown RBP4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 MYCT1Q8N699 235 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 SPATA5Q8NB90 893 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 STT3BQ8TCJ2 826 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 SLC22A17Q8WUG5 538 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 DDB2Q92466 427 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 PAGR1Q9BTK6 254 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 TMEM120AQ9BXJ8 343 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 CDCP1Q9H5V8 836 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 ABHD10Q9NUJ1 306 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 SEMA5BQ9P283 1151 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 GRHPRQ9UBQ7 328 aa4.2□□□□□ -1.74
TRAPPC13-204ENST00000438419 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 EFCAB8A8MWE9 144 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 PRRT4C9JH25 899 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 NPHP1O15259 732 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 ATF7P17544 494 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 CDK7P50613 346 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 RAPGEF1Q13905 1077 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 CC2D1BQ5T0F9 858 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 SULT6B1Q6IMI4 303 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 NFRKBQ6P4R8 1299 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 CCDC117Q8IWD4 279 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 CPXCR1Q8N123 301 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 NKAPQ8N5F7 415 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 OTUD7AQ8TE49 926 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 NPIPB3Q92617 1050 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 AKAP1Q92667 903 aaKnown RBP eCLIP4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 VOPP1Q96AW1 172 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 REXO5Q96IC2 774 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 MYLK2Q9H1R3 596 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 PRDM8Q9NQV8 689 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 ADARB2Q9NS39 739 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 LUZP4Q9P127 313 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 VPS4AQ9UN37 437 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 C19orf53Q9UNZ5 99 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 CNTN6Q9UQ52 1028 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 PCDHB7Q9Y5E2 793 aa4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 SIRT4Q9Y6E7 314 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-204ENST00000438419 LOC105369274A0A096LPK9 316 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 LOC102723532A0A0G2JNH3 316 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 FAM90A18PA6NE21 464 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 FAM90A16PA6NEW6 464 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 FAM90A9PA6NNJ1 464 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 FAM90A5PA8MXJ8 464 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 M0QZQ0 153 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 NKX2-8O15522 239 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 FAM90A15PP0C7V4 464 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 FAM90A14PP0C7W9 464 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 CYP2A6P11509 494 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 VEGFAP15692 232 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 SLC8A1P32418 973 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 THBS4P35443 961 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 SF3A3Q12874 501 aaKnown RBP eCLIP4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 PRKG1Q13976 671 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 AAK1Q2M2I8 961 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 BTBD16Q32M84 506 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 ZNF569Q5MCW4 686 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 C16orf89Q6UX73 402 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 RANBP10Q6VN20 620 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 RFX8Q6ZV50 586 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 ZNF354CQ86Y25 554 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 C16orf71Q8IYS4 520 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 OR4N4Q8N0Y3 316 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 OR1N1Q8NGS0 311 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 PPM1EQ8WY54 764 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 TRIM63Q969Q1 353 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 SEMA4CQ9C0C4 833 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 PABPC3Q9H361 631 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 CCDC134Q9H6E4 229 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 FLRT1Q9NZU1 646 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 ZBTB1Q9Y2K1 713 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 PCDHGB3Q9Y5G1 929 aa4.18□□□□□ -1.74
TRAPPC13-204ENST00000438419 KIF28PB7ZC32 967 aa4.17□□□□□ -1.74
TRAPPC13-204ENST00000438419 PPP6R2O75170 966 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms