RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ALAS2P22557 587 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 PTPN3P26045 913 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 POLD2P49005 469 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 BMPR2Q13873 1038 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 TMC5Q6UXY8 1006 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 SLC2A3P11169 496 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 ZNF37AP17032 561 aaPredicted RBP18.92■□□□□ 0.62
SHANK3-202ENST00000414786 RFC5P40937 340 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 WASP42768 502 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 COPAP53621 1224 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 RNF148Q8N7C7 305 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 TMEM138Q9NPI0 162 aa18.92■□□□□ 0.62
SHANK3-202ENST00000414786 A0A087WZ62 844 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 IL1BP01584 269 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 C3orf67Q6ZVT6 689 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 FDXACB1Q9BRP7 624 aaPredicted RBP18.91■□□□□ 0.62
SHANK3-202ENST00000414786 TRIM64A6NGJ6 449 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 IL1R1P14778 569 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 GCLCP48506 637 aaPredicted RBP18.91■□□□□ 0.62
SHANK3-202ENST00000414786 NRG3P56975 720 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 RPL10AP62906 217 aaKnown RBP18.91■□□□□ 0.62
SHANK3-202ENST00000414786 ZNF280DQ6N043 979 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 ZC3H7AQ8IWR0 971 aaKnown RBP18.91■□□□□ 0.62
SHANK3-202ENST00000414786 DAW1Q8N136 415 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 SMYD1Q8NB12 490 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 SNCAIPQ9Y6H5 919 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 STK36Q9NRP7 1315 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 RAD51CO43502 376 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 TIMM44O43615 452 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 CRATP43155 626 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 SRLQ86TD4 932 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 LNX2Q8N448 690 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 CLEC4MQ9H2X3 399 aaPredicted RBP18.91■□□□□ 0.62
SHANK3-202ENST00000414786 ATP10AO60312 1499 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 TMEM2Q9UHN6 1383 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 DCLK1O15075 740 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 PSIP1O75475 530 aaKnown RBP18.91■□□□□ 0.62
SHANK3-202ENST00000414786 TSPAN9O75954 239 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 ABHD14A-ACY1A0A1B0GW23 586 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 CBWD1Q9BRT8 395 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 RBM22Q9NW64 420 aaKnown RBP eCLIP18.91■□□□□ 0.624e-7■■□□□ 14
SHANK3-202ENST00000414786 ZNF112Q9UJU3 913 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 AAR2Q9Y312 384 aaKnown RBP18.91■□□□□ 0.62
SHANK3-202ENST00000414786 IL6P05231 212 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 RAET1GQ6H3X3 334 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 PEG10Q86TG7 708 aaKnown RBP18.91■□□□□ 0.62
SHANK3-202ENST00000414786 FBXO36Q8NEA4 188 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 CXorf40BQ96DE9 158 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 FERD3LQ96RJ6 166 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 MROH8Q9H579 483 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 UBQLN1Q9UMX0 589 aaKnown RBP18.91■□□□□ 0.62
SHANK3-202ENST00000414786 COG5Q9UP83 839 aa18.91■□□□□ 0.62
SHANK3-202ENST00000414786 USP15Q9Y4E8 981 aaPredicted RBP18.91■□□□□ 0.62
SHANK3-202ENST00000414786 TFPIP10646 304 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 MFSD7Q6UXD7 560 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 NEK6Q9HC98 313 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 HAO1Q9UJM8 370 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 LOC102724159A0A0B4J2E5 919 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 TSPAN19P0C672 248 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 PABPC1P11940 636 aaKnown RBP18.9■□□□□ 0.62
SHANK3-202ENST00000414786 ITPKBP27987 946 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 COPZ1P61923 177 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 PWP2Q15269 919 aaKnown RBP18.9■□□□□ 0.62
SHANK3-202ENST00000414786 TCHHL1Q5QJ38 904 aaPredicted RBP18.9■□□□□ 0.62
SHANK3-202ENST00000414786 PPIL6Q8IXY8 311 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 TMEM121Q9BTD3 319 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 ADAM30Q9UKF2 790 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 SEPT4O43236 478 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 KHDRBS3O75525 346 aaKnown RBP18.9■□□□□ 0.62
SHANK3-202ENST00000414786 GEMIN4P57678 1058 aaKnown RBP18.9■□□□□ 0.62
SHANK3-202ENST00000414786 ZNF543Q08ER8 600 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 ADGRG2Q8IZP9 1017 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 ATG10Q9H0Y0 220 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 MCIDASD6RGH6 385 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 DPF2Q92785 391 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 MARK4Q96L34 752 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 RBM12Q9NTZ6 932 aaKnown RBP18.9■□□□□ 0.62
SHANK3-202ENST00000414786 STAP2Q9UGK3 403 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 LIMD1Q9UGP4 676 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 SEPT3Q9UH03 358 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 NPHP4O75161 1426 aaPredicted RBP18.9■□□□□ 0.62
SHANK3-202ENST00000414786 GPR15P49685 360 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 CCDC144BQ3MJ40 725 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 SHC4Q6S5L8 630 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 UBAP1Q9NZ09 502 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 A0A0B4J269 797 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 TERF2Q15554 542 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 PRAMEF19Q5SWL8 479 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 TINF2Q9BSI4 451 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 TMEM8AQ9HCN3 771 aa18.9■□□□□ 0.62
SHANK3-202ENST00000414786 SMG5Q9UPR3 1016 aaKnown RBP18.9■□□□□ 0.62
SHANK3-202ENST00000414786 IGF2BP3O00425 579 aaKnown RBP eCLIP18.89■□□□□ 0.62
SHANK3-202ENST00000414786 ATP2C1P98194 919 aaPredicted RBP18.89■□□□□ 0.62
SHANK3-202ENST00000414786 NEDD8Q15843 81 aa18.89■□□□□ 0.62
SHANK3-202ENST00000414786 CDH24Q86UP0 819 aa18.89■□□□□ 0.62
SHANK3-202ENST00000414786 GRAMD1AQ96CP6 724 aa18.89■□□□□ 0.62
SHANK3-202ENST00000414786 C4BPBP20851 252 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 ADIGQ0VDE8 80 aa18.89■□□□□ 0.61
SHANK3-202ENST00000414786 NSL1Q96IY1 281 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms