RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PRKD1Q15139 912 aaPredicted RBP13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 SOWAHAQ2M3V2 549 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 RALGPS1Q5JS13 557 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 RABGAP1LQ5R372 815 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 WASHC2DQ5SRD0 308 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 TRIM42Q8IWZ5 723 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 CCNYL1Q8N7R7 359 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 SLC7A14Q8TBB6 771 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 EDEM1Q92611 657 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 CELF6Q96J87 481 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 PPCSQ9HAB8 311 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 SAR1AQ9NR31 198 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 NDE1Q9NXR1 346 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 ZBTB42B2RXF5 422 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 PROCP04070 461 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 TUBP50607 506 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 KCNJ11Q14654 390 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 DLG2Q15700 870 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 ANO7Q6IWH7 933 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 RIPOR1Q6ZS17 1223 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 SPNS2Q8IVW8 549 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 UBR7Q8N806 425 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 OR52K1Q8NGK4 314 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 LENG1Q96BZ8 264 aaPredicted RBP13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 C20orf27Q9GZN8 174 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 POPDC2Q9HBU9 364 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 CHADO15335 359 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 DCXO43602 365 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 SORBS2O94875 1100 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 SERPINB5P36952 375 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 HSP90AA5PQ58FG0 334 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 HTR3CQ8WXA8 447 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 EBNA1BP2Q99848 306 aaKnown RBP13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 PHACTR1Q9C0D0 580 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 SNX10Q9Y5X0 201 aa13.06□□□□□ -0.32
PPP4R1-202ENST00000400555 SLC34A1Q06495 639 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 PDK2Q15119 407 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 C10orf107Q8IVU9 208 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 BEST2Q8NFU1 509 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 SPDYE1Q8NFV5 336 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 FNIP1Q8TF40 1166 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 MARK4Q96L34 752 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 TUBB6Q9BUF5 446 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 RBPJLQ9UBG7 517 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 ADAMTS5Q9UNA0 930 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 SLC1A6P48664 564 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 HIC1Q14526 733 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 TWF2Q6IBS0 349 aaKnown RBP13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 C12orf42Q96LP6 360 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 ZMAT2Q96NC0 199 aaKnown RBP13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 ZCWPW1Q9H0M4 648 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 PRDM12Q9H4Q4 367 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 KCNK13Q9HB14 408 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 CDHR5Q9HBB8 845 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 HUS1O60921 280 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 DNAJC6O75061 913 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 MCF2P10911 925 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 EXOC8Q8IYI6 725 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 TEKT4Q8WW24 435 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 OPTNQ96CV9 577 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 TSNARE1Q96NA8 513 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 KCTD15Q96SI1 283 aaPredicted RBP13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 ATXN3LQ9H3M9 355 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 CYP3A43Q9HB55 503 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 SLC39A10Q9ULF5 831 aa13.05□□□□□ -0.32
PPP4R1-202ENST00000400555 IGKV6D-21A0A0A0MT36 114 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 RECQL4O94761 1208 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 LMNAP02545 664 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 IL4RP24394 825 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 NEK3P51956 506 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 MAP3K7CLP57077 242 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 LCLAT1Q6UWP7 414 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 CSPG4P5Q96PW8 444 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 SYT15Q9BQS2 421 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 BCO2Q9BYV7 579 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 ASB7Q9H672 318 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 XPNPEP3Q9NQH7 507 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 SYBUQ9NX95 663 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 SDR42E2A6NKP2 422 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 ABLIM1O14639 778 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 SPAG6O75602 509 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 RFPL1O75677 317 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 C22orf31O95567 290 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 MT-CO1P00395 513 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 CDH5P33151 784 aaPredicted RBP13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 MRPS5P82675 430 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 ASPHQ12797 758 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 RNF181Q9P0P0 153 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 ZNF112Q9UJU3 913 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 MFSD11O43934 449 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 ATP6V1C1P21283 382 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 SNX16P57768 344 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 DEUP1Q05D60 604 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 GRIK4Q16099 956 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 STRA8Q7Z7C7 330 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 DEFB107AQ8IZN7 70 aa13.04□□□□□ -0.32
PPP4R1-202ENST00000400555 DTLQ9NZJ0 730 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 308 ms