RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TTC30AQ86WT1 665 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 SARS2Q9NP81 518 aaKnown RBP14.45□□□□□ -0.1
SCAF4-202ENST00000399804 TLR8Q9NR97 1041 aaKnown RBP14.45□□□□□ -0.1
SCAF4-202ENST00000399804 TRPM5Q9NZQ8 1165 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 TMEM59LQ9UK28 342 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 SLC39A10Q9ULF5 831 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 Q9Y3F1 56 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 F5H5T6 163 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 SOCS7O14512 581 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 EDN1P05305 212 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 NDUFV1P49821 464 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 GBE1Q04446 702 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 STX3Q13277 289 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 CCNJLQ8IV13 435 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 UROC1Q96N76 676 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 ZMAT2Q96NC0 199 aaKnown RBP14.45□□□□□ -0.1
SCAF4-202ENST00000399804 SERPINB11Q96P15 392 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 YME1L1Q96TA2 773 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 ABCC13Q9NSE7 274 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 DDX20Q9UHI6 824 aaKnown RBP14.45□□□□□ -0.1
SCAF4-202ENST00000399804 GABRQQ9UN88 632 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.45□□□□□ -0.1
SCAF4-202ENST00000399804 AAR2Q9Y312 384 aaKnown RBP14.45□□□□□ -0.1
SCAF4-202ENST00000399804 HCRTO43612 131 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 PYGBP11216 843 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 TAC1P20366 129 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 CORO7P57737 925 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 DDR2Q16832 855 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 EFHBQ8N7U6 833 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 CLEC4CQ8WTT0 213 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 NKD2Q969F2 451 aaPredicted RBP14.45□□□□□ -0.1
SCAF4-202ENST00000399804 MCRS1Q96EZ8 462 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 LSM7Q9UK45 103 aaKnown RBP14.45□□□□□ -0.1
SCAF4-202ENST00000399804 GRID1Q9ULK0 1009 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 VANGL2Q9ULK5 521 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 MGAT1P26572 445 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 OGDHQ02218 1023 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 OVGP1Q12889 678 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 E2F5Q15329 346 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 ANKRD20A2Q5SQ80 823 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 ANKRD20A1Q5TYW2 823 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 RNF219Q5W0B1 726 aaPredicted RBP14.44□□□□□ -0.1
SCAF4-202ENST00000399804 STRADAQ7RTN6 431 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 TRPM8Q7Z2W7 1104 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 PLD5Q8N7P1 536 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 STK32AQ8WU08 396 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 EMID1Q96A84 441 aaPredicted RBP14.44□□□□□ -0.1
SCAF4-202ENST00000399804 PCED1BQ96HM7 432 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 KCNK16Q96T55 309 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 HNRNPABQ99729 332 aaKnown RBP14.44□□□□□ -0.1
SCAF4-202ENST00000399804 TUBB6Q9BUF5 446 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 FTHL17Q9BXU8 183 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 MANSC1Q9H8J5 431 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 BAG2O95816 211 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 URODP06132 367 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 MMEL1Q495T6 779 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 MRPL9Q9BYD2 267 aaKnown RBP14.44□□□□□ -0.1
SCAF4-202ENST00000399804 PIDD1Q9HB75 910 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 NT5MQ9NPB1 228 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 SLC27A5Q9Y2P5 690 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 MYH15Q9Y2K3 1946 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 WDR27A2RRH5 827 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 HACD1B0YJ81 288 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 RAG1P15918 1043 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 IL1R2P27930 398 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 ATXN1P54253 815 aaKnown RBP14.44□□□□□ -0.1
SCAF4-202ENST00000399804 GEMP55040 296 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 KBTBD12Q3ZCT8 623 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 TMEM130Q8N3G9 435 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 C12orf50Q8NA57 414 aaPredicted RBP14.44□□□□□ -0.1
SCAF4-202ENST00000399804 ATXN3LQ9H3M9 355 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 FAM124BQ9H5Z6 455 aaPredicted RBP14.44□□□□□ -0.1
SCAF4-202ENST00000399804 USH1CQ9Y6N9 552 aa14.44□□□□□ -0.1
SCAF4-202ENST00000399804 A0A0A0MRY4 1105 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ADRA1BP35368 520 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ACLYP53396 1101 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 CRADDP78560 199 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 BTG3Q14201 252 aaPredicted RBP14.43□□□□□ -0.1
SCAF4-202ENST00000399804 NOMO1Q15155 1222 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 GPR152Q8TDT2 470 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 SPATA13Q96N96 652 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 SMPD4Q9NXE4 827 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ARHGEF38Q9NXL2 777 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 GTSE1Q9NYZ3 720 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 GRHL1Q9NZI5 618 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.43□□□□□ -0.1
SCAF4-202ENST00000399804 GYG2O15488 501 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 DAB1O75553 588 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ZNF177Q13360 481 aaPredicted RBP14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ARHGAP17Q68EM7 881 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 RFX8Q6ZV50 586 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 TEKT4Q8WW24 435 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ERP27Q96DN0 273 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 CSPG4P5Q96PW8 444 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 TASP1Q9H6P5 420 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 ECT2Q9H8V3 914 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 PTPRHQ9HD43 1115 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 MARCH2Q9P0N8 246 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 CCT8L1PA6NM43 557 aa14.43□□□□□ -0.1
SCAF4-202ENST00000399804 AVILO75366 819 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms