RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 SNX27Q96L92 541 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 TSSK1BQ9BXA7 367 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 DNALI1O14645 258 aaPredicted RBP13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 XPO1O14980 1071 aaKnown RBP13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 TLR5O60602 858 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 PPFIA2O75334 1257 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 ERBB2P04626 1255 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 MATKP42679 507 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 NR2C2P49116 596 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 APLP1P51693 650 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 RAD23BP54727 409 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 CES3Q6UWW8 571 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 LPCAT1Q8NF37 534 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 XPO6Q96QU8 1125 aaKnown RBP13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 SHOC2Q9UQ13 582 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 NAALADL1Q9UQQ1 740 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 TRDMT1O14717 391 aaKnown RBP13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 ETS1P14921 441 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 SSTR1P30872 391 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 FLT3P36888 993 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 IL1RL1Q01638 556 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 CCNJLQ8IV13 435 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 LRRC15Q8TF66 581 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 N4BP2L2Q92802 583 aaPredicted RBP13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 ERLEC1Q96DZ1 483 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 FOPNLQ96NB1 174 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 SERPINB12Q96P63 405 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 FAM111AQ96PZ2 611 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 NPHS2Q9NP85 383 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 SPG21Q9NZD8 308 aa13.48□□□□□ -0.25
PTPRN2-202ENST00000389416 KIF3CO14782 793 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 GSTA4O15217 222 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 CAND2O75155 1236 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 RGS20O76081 388 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 FAM153BP0C7A2 387 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 HNRNPH2P55795 449 aaKnown RBP13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 FAM153CQ494X1 144 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 PTAR1Q7Z6K3 402 aaPredicted RBP13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 TMEM139Q8IV31 216 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 TFAP2BQ92481 460 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 CD274Q9NZQ7 290 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 FAM153AQ9UHL3 310 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 OR6C75A6NL08 312 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 OPHN1O60890 802 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 H2AFXP16104 143 aaPredicted RBP13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 GOT1P17174 413 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 NOVP48745 357 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 GTF2A1P52655 376 aaPredicted RBP13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 HTRA3P83110 453 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 SMAD3P84022 425 aaKnown RBP13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 TARBP2Q15633 366 aaKnown RBP13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 ANKRD20A8PQ5CZ79 823 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 LRRC38Q5VT99 294 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 ADCK2Q7Z695 626 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 RNF157Q96PX1 679 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 PAFAH2Q99487 392 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 ARHGAP39Q9C0H5 1083 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 ASAH2Q9NR71 780 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 DNMT3LQ9UJW3 386 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 TRIM33Q9UPN9 1127 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 MRPS23Q9Y3D9 190 aaKnown RBP13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 ITGB4P16144 1822 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 NCANO14594 1321 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 SUPT3HB4E1H0 165 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 SUPT3HO75486 399 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 ACRP10323 421 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 MYL2P10916 166 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 PBX3P40426 434 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 BMPR2Q13873 1038 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 TRIM68Q6AZZ1 485 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 PRUNE1Q86TP1 453 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 DENND1CQ8IV53 801 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 RIBC1Q8N443 379 aaPredicted RBP13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 PRDM12Q9H4Q4 367 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 MSRAQ9UJ68 235 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 CHD4Q14839 1912 aa13.47□□□□□ -0.25
PTPRN2-202ENST00000389416 TMEM191CA6NGB0 347 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 CES2O00748 559 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 ERCC2P18074 760 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 HMOX2P30519 316 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 PURAQ00577 322 aaKnown RBP13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 SPATA21Q7Z572 469 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 DPEP3Q9H4B8 488 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 SRP72O76094 671 aaKnown RBP13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 F2P00734 622 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 FGBP02675 491 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 SP100P23497 879 aaPredicted RBP13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 PAX3P23760 479 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 GLRBP48167 497 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 TAF10Q12962 218 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 PLPP4Q5VZY2 271 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 PMF1Q6P1K2 205 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 STRA8Q7Z7C7 330 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 SPPL2BQ8TCT7 592 aa13.46□□□□□ -0.25
PTPRN2-202ENST00000389416 CCT8L2Q96SF2 557 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms