RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 KCNK16Q96T55 309 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 VANGL2Q9ULK5 521 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 SYN3O14994 580 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 MAGEC1O60732 1142 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 APODP05090 189 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 YBX3P16989 372 aaKnown RBP eCLIP10.11□□□□□ -0.798e-7■□□□□ 10.9
SCAF11-202ENST00000369367 ZC3H12BQ5HYM0 836 aaKnown RBP10.11□□□□□ -0.79
SCAF11-202ENST00000369367 KIAA1324Q6UXG2 1013 aaKnown RBP10.11□□□□□ -0.79
SCAF11-202ENST00000369367 MON1AQ86VX9 555 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 NPAS4Q8IUM7 802 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 CEP70Q8NHQ1 597 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 GPR20Q99678 358 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 RNPEPQ9H4A4 650 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 PCDH9Q9HC56 1237 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 CNGB3Q9NQW8 809 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 RGS18Q9NS28 235 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 SRRDQ9UH36 339 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 SPTLC1O15269 473 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 ONECUT3O60422 494 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-202ENST00000369367 TADA3O75528 432 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 ENDOD1O94919 500 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 IFNA14P01570 189 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 TPBGLP0DKB5 382 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 RARGP13631 454 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 PRKAA2P54646 552 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 CAPSQ13938 189 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 LYPLAL1Q5VWZ2 237 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 FOXR2Q6PJQ5 311 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 OTOAQ7RTW8 1153 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 ZNF333Q96JL9 665 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 GPR88Q9GZN0 384 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 ILKAPQ9H0C8 392 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-202ENST00000369367 IL25Q9H293 177 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 KCTD10Q9H3F6 313 aa10.11□□□□□ -0.79
SCAF11-202ENST00000369367 PFKMP08237 780 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 CYP3A5P20815 502 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 FPGSQ05932 587 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 RASIP1Q5U651 963 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 PPP4R4Q6NUP7 873 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 SMG7Q92540 1137 aaKnown RBP10.1□□□□□ -0.79
SCAF11-202ENST00000369367 UBE2E3Q969T4 207 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 SERPINB12Q96P63 405 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 H2AFY2Q9P0M6 372 aaPredicted RBP10.1□□□□□ -0.79
SCAF11-202ENST00000369367 BTBD7Q9P203 1132 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 ACOT9Q9Y305 439 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 RAD51BO15315 384 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 RFC2P35250 354 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 PRIM2P49643 509 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 XRCC4Q13426 336 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 MTF1Q14872 753 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 C2orf15Q8WU43 125 aaKnown RBP10.1□□□□□ -0.79
SCAF11-202ENST00000369367 QRFPRQ96P65 431 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 SH3GL1Q99961 368 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 TKTL2Q9H0I9 626 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 CTNNAL1Q9UBT7 734 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 MTO1Q9Y2Z2 717 aaKnown RBP10.1□□□□□ -0.79
SCAF11-202ENST00000369367 STARD13Q9Y3M8 1113 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 F8W810 466 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 GGCXP38435 758 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 NAA20P61599 178 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 CDK16Q00536 496 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 MGAT5Q09328 741 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 NAB1Q13506 487 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 KLHL35Q6PF15 583 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 TMEM161BQ8NDZ6 487 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 HEXDCQ8WVB3 486 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 OR8D1Q8WZ84 308 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 TATDN2Q93075 761 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 LRRC1Q9BTT6 524 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 TAS2R13Q9NYV9 303 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 ADGRA2Q96PE1 1338 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 MGAT4DA6NG13 374 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 YDJCA8MPS7 323 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 GPR25O00155 361 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 BRMS1LQ5PSV4 323 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 RARS2Q5T160 578 aaKnown RBP10.1□□□□□ -0.79
SCAF11-202ENST00000369367 KHDRBS2Q5VWX1 349 aaKnown RBP10.1□□□□□ -0.79
SCAF11-202ENST00000369367 HLA-DQA1Q5Y7H0 255 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 COLGALT1Q8NBJ5 622 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 TRIM51Q9BSJ1 452 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 ZYG11BQ9C0D3 744 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 MAPRE3Q9UPY8 281 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 PNMA6AP0CW24 399 aaPredicted RBP10.1□□□□□ -0.79
SCAF11-202ENST00000369367 STX5Q13190 355 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 MAD2L1Q13257 205 aaPredicted RBP10.1□□□□□ -0.79
SCAF11-202ENST00000369367 MPP3Q13368 585 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 GRIK5Q16478 980 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 BEND6Q5SZJ8 279 aaPredicted RBP10.1□□□□□ -0.79
SCAF11-202ENST00000369367 HTR3CQ8WXA8 447 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 STARD8Q92502 1023 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 SLC35C1Q96A29 364 aa10.1□□□□□ -0.79
SCAF11-202ENST00000369367 TMEM114B3SHH9 223 aa10.09□□□□□ -0.79
SCAF11-202ENST00000369367 CXCR2P25025 360 aa10.09□□□□□ -0.79
SCAF11-202ENST00000369367 MRPS25P82663 173 aaKnown RBP10.09□□□□□ -0.79
SCAF11-202ENST00000369367 TFAP2DQ7Z6R9 452 aa10.09□□□□□ -0.79
SCAF11-202ENST00000369367 TMCO1Q9UM00 188 aa10.09□□□□□ -0.79
SCAF11-202ENST00000369367 TRUB2O95900 331 aaKnown RBP10.09□□□□□ -0.79
SCAF11-202ENST00000369367 CATP04040 527 aaKnown RBP10.09□□□□□ -0.79
SCAF11-202ENST00000369367 CSE1LP55060 971 aaKnown RBP10.09□□□□□ -0.79
SCAF11-202ENST00000369367 CBWD3Q5JTY5 395 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms