RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ATPAF1Q5TC12 328 aaPredicted RBP6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 RINT1Q6NUQ1 792 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 GPR149Q86SP6 731 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 FSTL5Q8N475 847 aaPredicted RBP6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 C11orf44Q8N8P7 122 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 SUN3Q8TAQ9 357 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 CXorf38Q8TB03 319 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 SPPL3Q8TCT6 385 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 PIGBQ92521 554 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 RSC1A1Q92681 617 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 GLG1Q92896 1179 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 PTCD3Q96EY7 689 aaKnown RBP6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 COG3Q96JB2 828 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 TBATAQ96M53 351 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 WDR24Q96S15 920 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 HAPLN3Q96S86 360 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 GPR20Q99678 358 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 ANAPC4Q9UJX5 808 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 DRG1Q9Y295 367 aaKnown RBP6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 TESMINQ9Y4I5 508 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 WNK3Q9BYP7 1800 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 COL15A1P39059 1388 aa6.4□□□□□ -1.39
RNU4-39P-201ENST00000362455 RGPD5Q99666 1765 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 RRN3P2A6NIE6 340 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 B9A039 149 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 LPXNO60711 386 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 TAF5LO75529 589 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 PYGLP06737 847 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 RHOP08100 348 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 ADD2P35612 726 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 AMPHP49418 695 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 PRKAA2P54646 552 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 TIRAPP58753 221 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 GUCY1B3Q02153 619 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 ITIH3Q06033 890 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 ITPK1Q13572 414 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 BTBD16Q32M84 506 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 ADCK5Q3MIX3 580 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 SPDYAQ5MJ70 313 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 FBXO47Q5MNV8 452 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 MAVSQ7Z434 540 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 DTX2Q86UW9 622 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 FTSJ3Q8IY81 847 aaKnown RBP6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 METTL25Q8N6Q8 603 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 MYCBPAPQ8TBZ2 947 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 EIF2AK1Q9BQI3 630 aaKnown RBP6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 NUDT22Q9BRQ3 303 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 GLOD4Q9HC38 313 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 IGSF1Q8N6C5 1336 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 PALLDQ8WX93 1383 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 USP47Q96K76 1375 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 BTAF1O14981 1849 aa6.39□□□□□ -1.39
RNU4-39P-201ENST00000362455 CBFA2T3O75081 653 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 CUL4BQ13620 913 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 CLCA4Q14CN2 919 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 NRN1LQ496H8 165 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 TIGD2Q4W5G0 525 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 CAND1Q86VP6 1230 aaKnown RBP6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 TTC30AQ86WT1 665 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 SYNE4Q8N205 404 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 CLASRPQ8N2M8 674 aaKnown RBP6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 TOR1AIP2Q8NFQ8 470 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 WDR60Q8WVS4 1066 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 THAP4Q8WY91 577 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 DVL3Q92997 716 aaPredicted RBP6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 FKBP10Q96AY3 582 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 CDK5RAP1Q96SZ6 601 aaKnown RBP6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 TAF1DQ9H5J8 278 aaPredicted RBP6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 TBCCD1Q9NVR7 557 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 FEM1BQ9UK73 627 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 GJD2Q9UKL4 321 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 PNMA2Q9UL42 364 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 DAPP1Q9UN19 280 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 COL24A1Q17RW2 1714 aa6.38□□□□□ -1.39
RNU4-39P-201ENST00000362455 AKAP12Q02952 1782 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 USP54Q70EL1 1684 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 FAM208AQ9UK61 1670 aaKnown RBP6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 CGNL1Q0VF96 1302 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 CENPVL1A0A0U1RR11 272 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 A1L4Q6 167 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 FAM90A18PA6NE21 464 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 FAM90A16PA6NEW6 464 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 FAM90A9PA6NNJ1 464 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 FAM90A5PA8MXJ8 464 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 SLC16A3O15427 465 aaKnown RBP6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 PROM1O43490 865 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 C1SP09871 688 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 FAM90A15PP0C7V4 464 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 FAM90A14PP0C7W9 464 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 CKMT1AP12532 417 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 CLCN2P51788 898 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 NXPH1P58417 271 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 CSHL1Q14406 222 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 ACOX1Q15067 660 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 CDSNQ15517 529 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 TBCCQ15814 346 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 TRIM60Q495X7 471 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 ANKRD45Q5TZF3 282 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 NFRKBQ6P4R8 1299 aa6.37□□□□□ -1.39
RNU4-39P-201ENST00000362455 VWA1Q6PCB0 445 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms