RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 DNAAF5Q86Y56 855 aa9.99□□□□□ -0.81
GABPA-201ENST00000354828 C12orf29Q8N999 325 aa9.99□□□□□ -0.81
GABPA-201ENST00000354828 SGF29Q96ES7 293 aa9.99□□□□□ -0.81
GABPA-201ENST00000354828 MRPL45Q9BRJ2 306 aaKnown RBP9.99□□□□□ -0.81
GABPA-201ENST00000354828 LRRC1Q9BTT6 524 aa9.99□□□□□ -0.81
GABPA-201ENST00000354828 CARD9Q9H257 536 aa9.99□□□□□ -0.81
GABPA-201ENST00000354828 OSGEPQ9NPF4 335 aa9.99□□□□□ -0.81
GABPA-201ENST00000354828 PLK2Q9NYY3 685 aa9.99□□□□□ -0.81
GABPA-201ENST00000354828 SPASTQ9UBP0 616 aa9.99□□□□□ -0.81
GABPA-201ENST00000354828 DRG1Q9Y295 367 aaKnown RBP9.99□□□□□ -0.81
GABPA-201ENST00000354828 C10orf71Q711Q0 1435 aa9.99□□□□□ -0.81
GABPA-201ENST00000354828 WASP42768 502 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 MMP13P45452 471 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 MCL1Q07820 350 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 MARK2Q7KZI7 788 aaKnown RBP9.98□□□□□ -0.81
GABPA-201ENST00000354828 MON1AQ86VX9 555 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 PDCD7Q8N8D1 485 aaKnown RBP9.98□□□□□ -0.81
GABPA-201ENST00000354828 COLGALT1Q8NBJ5 622 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 KAT5Q92993 513 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 PSD3Q9NYI0 1048 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 SELENONQ9NZV5 590 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 ZNF510Q9Y2H8 683 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 SDR42E2A6NKP2 422 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 KCNK1O00180 336 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 CALRP27797 417 aaKnown RBP9.98□□□□□ -0.81
GABPA-201ENST00000354828 PTPN7P35236 360 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 MAGEA4P43358 317 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 KDSRQ06136 332 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 XRCC4Q13426 336 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 HIC1Q14526 733 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 EFTUD2Q15029 972 aaKnown RBP eCLIP9.98□□□□□ -0.81
GABPA-201ENST00000354828 PRSS55Q6UWB4 352 aaPredicted RBP9.98□□□□□ -0.81
GABPA-201ENST00000354828 VSTM1Q6UX27 236 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 PTAR1Q7Z6K3 402 aaPredicted RBP9.98□□□□□ -0.81
GABPA-201ENST00000354828 EXD1Q8NHP7 514 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 DNAJC19Q96DA6 116 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 VCPIP1Q96JH7 1222 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 PKNOX2Q96KN3 472 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 OXCT2Q9BYC2 517 aaPredicted RBP9.98□□□□□ -0.81
GABPA-201ENST00000354828 UTP6Q9NYH9 597 aaKnown RBP9.98□□□□□ -0.81
GABPA-201ENST00000354828 TDRKHQ9Y2W6 561 aaKnown RBP9.98□□□□□ -0.81
GABPA-201ENST00000354828 DYRK1BQ9Y463 629 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 C5orf58C9J3I9 102 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 DYRK3O43781 588 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 GJB6O95452 261 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 MYL2P10916 166 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 ITGB6P18564 788 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 POU6F1Q14863 301 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 TRADDQ15628 312 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 CCDC38Q502W7 563 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 FOXR1Q6PIV2 292 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 TRABDQ9H4I3 376 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 DHX33Q9H6R0 707 aaKnown RBP9.98□□□□□ -0.81
GABPA-201ENST00000354828 DCTN4Q9UJW0 460 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 PLIN4Q96Q06 1357 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 SYN3O14994 580 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 MEFVO15553 781 aaPredicted RBP9.98□□□□□ -0.81
GABPA-201ENST00000354828 CALCAP01258 141 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 GGCXP38435 758 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 PBX3P40426 434 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 E2F4Q16254 413 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 FAM83EQ2M2I3 478 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 FIGNQ5HY92 759 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 C6orf10Q5SRN2 563 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 RFWD2Q8NHY2 731 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 LRRC40Q9H9A6 602 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 ZFP14Q9HCL3 533 aa9.98□□□□□ -0.81
GABPA-201ENST00000354828 A0A0B4J269 797 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 NCF1BA6NI72 391 aaPredicted RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 NCF1CA8MVU1 366 aaPredicted RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 NCF1P14598 390 aaPredicted RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 ALOX15P16050 662 aaPredicted RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 MIPP30301 263 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ARHGDIAP52565 204 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 BOP1Q14137 746 aaKnown RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 GRAMD4Q6IC98 578 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 KCNT2Q6UVM3 1135 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TRAPPC5Q8IUR0 188 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ACTL9Q8TC94 416 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TRIB2Q92519 343 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 DUSP9Q99956 384 aaKnown RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 TMEM121Q9BTD3 319 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TUBB6Q9BUF5 446 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 FOXP3Q9BZS1 431 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 POLR1EQ9GZS1 481 aaKnown RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 ABCG4Q9H172 646 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ASTN1O14525 1302 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TBC1D3DA0A087WVF3 549 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TBC1D3IA0A087WXS9 549 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TBC1D3EA0A087X179 549 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TBC1D3KA0A087X1G2 549 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TBC1D3FA6NER0 549 aaPredicted RBP9.97□□□□□ -0.81
GABPA-201ENST00000354828 TBC1D3LB9A6J9 549 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 E2F6O75461 281 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 PFKMP08237 780 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 TBC1D3HP0C7X1 549 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 AMD1P17707 334 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 PTPN3P26045 913 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 ARL2P36404 184 aa9.97□□□□□ -0.81
GABPA-201ENST00000354828 SARSP49591 514 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms