RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 SLC39A13Q96H72 371 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 LMLNQ96KR4 655 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 FCRL2Q96LA5 508 aaPredicted RBP17.78■□□□□ 0.44
BRCC3-202ENST00000340647 TMEM74BQ9NUR3 256 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 CALCOCO1Q9P1Z2 691 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 THAP10Q9P2Z0 257 aaPredicted RBP17.78■□□□□ 0.44
BRCC3-202ENST00000340647 APEX2Q9UBZ4 518 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 NAALADL1Q9UQQ1 740 aa17.78■□□□□ 0.44
BRCC3-202ENST00000340647 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 ALDH1A2O94788 518 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 RHOBTB1O94844 696 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 ADRB1P08588 477 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 PNMA6AP0CW24 399 aaPredicted RBP17.77■□□□□ 0.44
BRCC3-202ENST00000340647 HLA-FP30511 346 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 LIMK1P53667 647 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 CREB5Q02930 508 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 TAF5Q15542 800 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 ELF2Q15723 593 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 MEA1Q16626 185 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 ARHGAP44Q17R89 818 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 EXOC3L4Q17RC7 722 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 HSP90AA4PQ58FG1 418 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 ADGRF1Q5T601 910 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 GBP6Q6ZN66 633 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 TRMT11Q7Z4G4 463 aaKnown RBP17.77■□□□□ 0.44
BRCC3-202ENST00000340647 CREBRFQ8IUR6 639 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 TMEFF1Q8IYR6 380 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 CHPFQ8IZ52 775 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 GPT2Q8TD30 523 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 DQX1Q8TE96 717 aaKnown RBP17.77■□□□□ 0.44
BRCC3-202ENST00000340647 STK32AQ8WU08 396 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 RNF139Q8WU17 664 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 MRGPRX1Q96LB2 322 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 THAP9Q9H5L6 903 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 VPS45Q9NRW7 570 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 STON1Q9Y6Q2 735 aa17.77■□□□□ 0.44
BRCC3-202ENST00000340647 IGHV1OR15-9A0A0B4J2B8 117 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 E5RJQ4 531 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 FBXO21O94952 628 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 CAVIN2O95810 425 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 LATS1O95835 1130 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 IGLV3-25P01717 112 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 GNA15P30679 374 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 CLCN1P35523 988 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 HARS2P49590 506 aaKnown RBP17.76■□□□□ 0.43
BRCC3-202ENST00000340647 RFWD3Q6PCD5 774 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 ENOSF1Q7L5Y1 443 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 DDI1Q8WTU0 396 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 MKRN2Q9H000 416 aaKnown RBP17.76■□□□□ 0.43
BRCC3-202ENST00000340647 NUP62CLQ9H1M0 184 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 SAMSN1Q9NSI8 373 aaKnown RBP17.76■□□□□ 0.43
BRCC3-202ENST00000340647 ELOVL2Q9NXB9 296 aa17.76■□□□□ 0.43
BRCC3-202ENST00000340647 XPO7Q9UIA9 1087 aaKnown RBP17.76■□□□□ 0.43
BRCC3-202ENST00000340647 NYNRINQ9P2P1 1898 aaKnown RBP17.75■□□□□ 0.43
BRCC3-202ENST00000340647 LNP1A1A4G5 178 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 FOXN3O00409 490 aaPredicted RBP17.75■□□□□ 0.43
BRCC3-202ENST00000340647 PRKCHP24723 683 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 ERCC5P28715 1186 aaPredicted RBP17.75■□□□□ 0.43
BRCC3-202ENST00000340647 RING1Q06587 406 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 MAN2A1Q16706 1144 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 FUT11Q495W5 492 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 MPPE1Q53F39 396 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 PIK3R6Q5UE93 754 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 RBM43Q6ZSC3 357 aaKnown RBP17.75■□□□□ 0.43
BRCC3-202ENST00000340647 NUDT18Q6ZVK8 323 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 ADIPOR2Q86V24 386 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.75■□□□□ 0.43
BRCC3-202ENST00000340647 ADAM32Q8TC27 787 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 PRICKLE1Q96MT3 831 aaPredicted RBP17.75■□□□□ 0.43
BRCC3-202ENST00000340647 CPXM1Q96SM3 734 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 SLC2A11Q9BYW1 496 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 ST7Q9NRC1 585 aa17.75■□□□□ 0.43
BRCC3-202ENST00000340647 BCCIPQ9P287 314 aaKnown RBP eCLIP17.75■□□□□ 0.43
BRCC3-202ENST00000340647 USP24Q9UPU5 2620 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 THAP12O43422 761 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 ACSL4O60488 711 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 C7P10643 843 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 NCAM1P13591 858 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 MTIF2P46199 727 aaKnown RBP17.74■□□□□ 0.43
BRCC3-202ENST00000340647 COPAP53621 1224 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 TBX4P57082 545 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 PDCLQ13371 301 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 ZNF234Q14588 700 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 PTPRNQ16849 979 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 AASDHQ4L235 1098 aaPredicted RBP17.74■□□□□ 0.43
BRCC3-202ENST00000340647 VWA3BQ502W6 1294 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 PPM1JQ5JR12 505 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 STPG1Q5TH74 334 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 PEAR1Q5VY43 1037 aaPredicted RBP17.74■□□□□ 0.43
BRCC3-202ENST00000340647 BEND5Q7L4P6 421 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 ARMCX6Q7L4S7 300 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 ANKS1BQ7Z6G8 1248 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 TAC4Q86UU9 113 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 C11orf74Q86VG3 221 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 SLC41A1Q8IVJ1 513 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 PGBD3Q8N328 593 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 DEFB119Q8N690 84 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 AZIN2Q96A70 460 aa17.74■□□□□ 0.43
BRCC3-202ENST00000340647 TMA16Q96EY4 203 aaKnown RBP17.74■□□□□ 0.43
BRCC3-202ENST00000340647 NDST4Q9H3R1 872 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms