RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 NPAP1Q9NZP6 1156 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 PRKAG2Q9UGJ0 569 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 ENOPH1Q9UHY7 261 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 AMFRQ9UKV5 643 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 STK36Q9NRP7 1315 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 A0A1W2PRQ8 180 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 ZNF98A6NK75 572 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 NDUFS2O75306 463 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 TTC4O95801 387 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 FOSP01100 380 aaPredicted RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 CPA2P48052 419 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 NPY2RP49146 381 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 NPEPPSP55786 919 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 BPIFB3P59826 476 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 ERVK-21P61565 698 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 NFATC3Q12968 1075 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 KRR1Q13601 381 aaKnown RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 ZFP69Q49AA0 526 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 FGD3Q5JSP0 725 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 DIS3L2Q8IYB7 885 aaKnown RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 CCDC105Q8IYK2 499 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 CADM2Q8N3J6 435 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 DHX38Q92620 1227 aaKnown RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 ART4Q93070 314 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 CLPTM1LQ96KA5 538 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 OSBPL11Q9BXB4 747 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 FOXP1Q9H334 677 aaPredicted RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 GOLPH3Q9H4A6 298 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 FBXO28Q9NVF7 368 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 DEPDC5O75140 1603 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 ARHGEF37A1IGU5 675 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 ISPDA4D126 451 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 AXIN1O15169 862 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 HOXA2O43364 376 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 ATG13O75143 517 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 KRT13P13646 458 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 CA4P22748 312 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 CASP3P42574 277 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 ARHGDIAP52565 204 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 VARS2Q5ST30 1063 aaKnown RBP8.84□□□□□ -0.99
TDP1-201ENST00000335725 ATG16L1Q676U5 607 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 RNF111Q6ZNA4 994 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 PLEKHM3Q6ZWE6 761 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 CATSPER3Q86XQ3 398 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 ACDQ96AP0 544 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.84□□□□□ -0.99
TDP1-201ENST00000335725 NAPBQ9H115 298 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 MRM3Q9HC36 420 aaKnown RBP8.84□□□□□ -0.99
TDP1-201ENST00000335725 ADGRE2Q9UHX3 823 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 STRIP2Q9ULQ0 834 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 RNF112Q9ULX5 631 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 CDC14AQ9UNH5 594 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 UGT2A1Q9Y4X1 527 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 ST14Q9Y5Y6 855 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 MYH6P13533 1939 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 MYOCOSA0A1B0GUC4 107 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 FAM83GA6ND36 823 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 ERVH48-1M5A8F1 160 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 THAP12O43422 761 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 IMPDH1P20839 514 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 F8A1P23610 371 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 PTX3P26022 381 aaPredicted RBP8.84□□□□□ -0.99
TDP1-201ENST00000335725 CASP1P29466 404 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 HARS2P49590 506 aaKnown RBP8.84□□□□□ -0.99
TDP1-201ENST00000335725 SERPINH1P50454 418 aaKnown RBP8.84□□□□□ -0.99
TDP1-201ENST00000335725 MYL6P60660 151 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 C6orf52Q5T4I8 152 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 MFSD6Q6ZSS7 791 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 ATG9AQ7Z3C6 839 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 PPM1KQ8N3J5 372 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 ZNF565Q8N9K5 539 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 MLPHQ9BV36 600 aaPredicted RBP8.84□□□□□ -0.99
TDP1-201ENST00000335725 JMJD4Q9H9V9 463 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 DNMT3LQ9UJW3 386 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 STOML2Q9UJZ1 356 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 SORCS3Q9UPU3 1222 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 ZNF804BA4D1E1 1349 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 TSPAN4O14817 238 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 PCSK2P16519 638 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 SERPINB5P36952 375 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 HTR2BP41595 481 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 RPL21P46778 160 aaKnown RBP8.84□□□□□ -0.99
TDP1-201ENST00000335725 TMBIM6P55061 237 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 NLRP11P59045 1033 aaKnown RBP8.84□□□□□ -0.99
TDP1-201ENST00000335725 TNFAIP2Q03169 654 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 FAPQ12884 760 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 TRIM28Q13263 835 aaKnown RBP8.84□□□□□ -0.99
TDP1-201ENST00000335725 NAB1Q13506 487 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 CCNIQ14094 377 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 PDK1Q15118 436 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 DLGAP5Q15398 846 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 ALX1Q15699 326 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 GPR107Q5VW38 600 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 TRAF7Q6Q0C0 670 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 FBXO11Q86XK2 927 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 ANKLE2Q86XL3 938 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 SNX31Q8N9S9 440 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 FNIP1Q8TF40 1166 aa8.84□□□□□ -0.99
TDP1-201ENST00000335725 SH3YL1Q96HL8 342 aaPredicted RBP8.84□□□□□ -0.99
TDP1-201ENST00000335725 TRIM8Q9BZR9 551 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms