RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 USP39Q53GS9 565 aaKnown RBP28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 TAC4Q86UU9 113 aa28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 KIAA2013Q8IYS2 634 aa28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 CHPFQ8IZ52 775 aa28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 FAM160A2Q8N612 972 aaPredicted RBP28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 AOPEPQ8N6M6 819 aa28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 ADAM32Q8TC27 787 aa28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 FCRL2Q96LA5 508 aaPredicted RBP28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 DDX50Q9BQ39 737 aaKnown RBP28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 FAM207AQ9NSI2 230 aaPredicted RBP28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 IRAK2O43187 625 aa28.72■■■□□ 2.19
ATPAF1-201ENST00000329231 HSF2BPO75031 334 aa28.72■■■□□ 2.19
ATPAF1-201ENST00000329231 HOXD9P28356 352 aaPredicted RBP28.72■■■□□ 2.19
ATPAF1-201ENST00000329231 KLK7P49862 253 aa28.72■■■□□ 2.19
ATPAF1-201ENST00000329231 OR6B2Q6IFH4 312 aa28.72■■■□□ 2.19
ATPAF1-201ENST00000329231 ANKS1BQ7Z6G8 1248 aa28.72■■■□□ 2.19
ATPAF1-201ENST00000329231 MDGA1Q8NFP4 955 aa28.72■■■□□ 2.19
ATPAF1-201ENST00000329231 SLC39A13Q96H72 371 aa28.72■■■□□ 2.19
ATPAF1-201ENST00000329231 PIWIL1Q96J94 861 aaKnown RBP28.72■■■□□ 2.19
ATPAF1-201ENST00000329231 TRUB2O95900 331 aaKnown RBP28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 ERBB2P04626 1255 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 HOXB2P14652 356 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 CDH5P33151 784 aaPredicted RBP28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 POLR2FP61218 127 aaKnown RBP28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 UBXN1Q04323 297 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 E2F5Q15329 346 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 TAF5Q15542 800 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 PTPN20Q4JDL3 420 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 DCAF6Q58WW2 860 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 FAM183BPQ6ZVS7 135 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 KBTBD6Q86V97 674 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 UCMAQ8WVF2 138 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 PCMTD1Q96MG8 357 aaPredicted RBP28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 BPIFA3Q9BQP9 254 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 TPSD1Q9BZJ3 242 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 BCCIPQ9P287 314 aaKnown RBP eCLIP28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 CLEC4EQ9ULY5 219 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 SIK3Q9Y2K2 1263 aa28.71■■■□□ 2.19
ATPAF1-201ENST00000329231 MYO18AQ92614 2054 aaKnown RBP28.7■■■□□ 2.19
ATPAF1-201ENST00000329231 TCRBV21S2A2A0A5A6 115 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 APOEP02649 317 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 CDK17Q00537 523 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 SYCP1Q15431 976 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 GEN1Q17RS7 908 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 SKOR2Q2VWA4 1001 aaPredicted RBP28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 FAM133BQ5BKY9 247 aaKnown RBP28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 MPP7Q5T2T1 576 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 PIK3R6Q5UE93 754 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 TAF3Q5VWG9 929 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 OLFML1Q6UWY5 402 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 C11orf74Q86VG3 221 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 ZDHHC17Q8IUH5 632 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 DDX1Q92499 740 aaKnown RBP28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 LOXL4Q96JB6 756 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 ZC3H10Q96K80 434 aaKnown RBP28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 SLC2A13Q96QE2 648 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 ACOX2Q99424 681 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 HSD3B7Q9H2F3 369 aa28.7■■■□□ 2.18
ATPAF1-201ENST00000329231 GOLGA6L7A0A1B0GV03 622 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 NPC1O15118 1278 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 ZBTB24O43167 697 aaPredicted RBP28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 LRP3O75074 770 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 LSM8O95777 96 aaKnown RBP28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 IGLV3-25P01717 112 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 WASP42768 502 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 SLC6A3Q01959 620 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 EIF4HQ15056 248 aaKnown RBP28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 RFWD3Q6PCD5 774 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 NOP9Q86U38 636 aaKnown RBP28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 DEFB106AQ8N104 65 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 HMGB4Q8WW32 186 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 SPAG5Q96R06 1193 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 GABRG3Q99928 467 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 NLRC4Q9NPP4 1024 aa28.69■■■□□ 2.18
ATPAF1-201ENST00000329231 SMTNL1A8MU46 457 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 TIMM44O43615 452 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 GFPT2O94808 682 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 SLC6A4P31645 630 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 GBP1P32455 592 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 SOX5P35711 763 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 NADSYN1Q6IA69 706 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 SLC26A9Q7LBE3 791 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 ZNF677Q86XU0 584 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 PGBD3Q8N328 593 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 NEK11Q8NG66 645 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 EPS8L1Q8TE68 723 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 FAM204AQ9H8W3 233 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 ELOVL2Q9NXB9 296 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 CFAP54Q96N23 3096 aa28.68■■■□□ 2.18
ATPAF1-201ENST00000329231 TYW5A2RUC4 315 aaKnown RBP28.67■■■□□ 2.18
ATPAF1-201ENST00000329231 EPHB6O15197 1021 aa28.67■■■□□ 2.18
ATPAF1-201ENST00000329231 GRAP2O75791 330 aa28.67■■■□□ 2.18
ATPAF1-201ENST00000329231 MOCS2O96007 188 aaPredicted RBP28.67■■■□□ 2.18
ATPAF1-201ENST00000329231 SLC2A3P11169 496 aa28.67■■■□□ 2.18
ATPAF1-201ENST00000329231 JAM2P57087 298 aa28.67■■■□□ 2.18
ATPAF1-201ENST00000329231 ELF2Q15723 593 aa28.67■■■□□ 2.18
ATPAF1-201ENST00000329231 PLK5Q496M5 336 aa28.67■■■□□ 2.18
ATPAF1-201ENST00000329231 ZC3H12AQ5D1E8 599 aaKnown RBP28.67■■■□□ 2.18
ATPAF1-201ENST00000329231 APTXQ7Z2E3 356 aaKnown RBP28.67■■■□□ 2.18
ATPAF1-201ENST00000329231 ZNF557Q8N988 423 aaPredicted RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms