RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 DHFRP00374 187 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 EPB42P16452 691 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 GPC1P35052 558 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 ABL2P42684 1182 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 USP10Q14694 798 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 ARL6IP4Q66PJ3 421 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 UGT3A1Q6NUS8 523 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 TDRD5Q8NAT2 981 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 RPS6KA6Q9UK32 745 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 PMF1-BGLAPU3KQ54 211 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 SH3D21A4FU49 640 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 RGSL1A5PLK6 1076 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 FOXN3O00409 490 aaPredicted RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 SYDE2Q5VT97 1194 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 LEMD2Q8NC56 503 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 INTS2Q9H0H0 1204 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 CCNE1P24864 410 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 TTKP33981 857 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 SMIM5Q71RC9 77 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 TAGLN3Q9UI15 199 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 PNMA8BQ9ULN7 279 aaPredicted RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 UBOX5O94941 541 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 SSTR3P32745 418 aaPredicted RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 INTS6LQ5JSJ4 861 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 TDRD1Q9BXT4 1180 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 NOTOA8MTQ0 251 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 IFNAR1P17181 557 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 CAV3P56539 151 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 Q3C1V9 767 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 EFHC2Q5JST6 749 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 BROXQ5VW32 411 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 ERAP2Q6P179 960 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 ZNF438Q7Z4V0 828 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 TOR4AQ9NXH8 423 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 REXO2Q9Y3B8 237 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 PSAPP07602 524 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 RAG1P15918 1043 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 SLC1A1P43005 524 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 TPI1P60174 286 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 OSTNP61366 133 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 DLG4P78352 724 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 ATPAF2Q8N5M1 289 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 PNPT1Q8TCS8 783 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 ZHX2Q9Y6X8 837 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 PNMA6FA0A0J9YX94 578 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 RAD51CO43502 376 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 RGS7P49802 495 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 PTGES3Q15185 160 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 ZNF713Q8N859 430 aaPredicted RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 CIDECQ96AQ7 238 aaPredicted RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 ATXN3LQ9H3M9 355 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 METTL5Q9NRN9 209 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 NMT2O60551 498 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 M0QYV0 167 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 MYL9P24844 172 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 DAW1Q8N136 415 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 OXER1Q8TDS5 423 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 PIF1Q9H611 641 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 CSADQ9Y600 493 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 SASH3O75995 380 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 GRIK3Q13003 919 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 SLC44A2Q8IWA5 706 aaPredicted RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 RCOR2Q8IZ40 523 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 SPTBN2O15020 2390 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 NEO1Q92859 1461 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 IFNA16P05015 189 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 SNRPAP09012 282 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 GHRP10912 638 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 ADSLP30566 484 aaPredicted RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 ACAP1Q15027 740 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 PM20D2Q8IYS1 436 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 CST11Q9H112 138 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 CCDC177Q9NQR7 707 aaPredicted RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 GSAPA4D1B5 854 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 HSD17B3P37058 310 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 GP5P40197 560 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 CYB5R4Q7L1T6 521 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 SPIRE2Q8WWL2 714 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 SLC9A8Q9Y2E8 581 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 BTBD19C9JJ37 291 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 SPRP35270 261 aaPredicted RBP11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 TBCELQ5QJ74 424 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 BBS1Q8NFJ9 593 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 HTRA1Q92743 480 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 MKNK1Q9BUB5 465 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 SP140LQ9H930 580 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 GPR108Q9NPR9 543 aa11.44□□□□□ -0.58
HDGFL3-201ENST00000299633 ABCC3O15438 1527 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 CDH6P55285 790 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 PRKG2Q13237 762 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 OTUD3Q5T2D3 398 aaPredicted RBP11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 OGFRL1Q5TC84 451 aaPredicted RBP11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 PPP1R10Q96QC0 940 aaKnown RBP11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 SENP7Q9BQF6 1050 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 STK32BQ9NY57 414 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 WDR37Q9Y2I8 494 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 MSLNQ13421 630 aaPredicted RBP11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 RIBC2Q9H4K1 309 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 AS3MTQ9HBK9 375 aa11.43□□□□□ -0.58
HDGFL3-201ENST00000299633 PIH1D3Q9NQM4 214 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms