RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 PTPN7P35236 360 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 ARSEP51690 589 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 ATP11AP98196 1134 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 TUBB2AQ13885 445 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 ADGRE1Q14246 886 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 GRIN2CQ14957 1233 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 HADHQ16836 314 aaKnown RBP7.78□□□□□ -1.16
VPS45-213ENST00000618148 BOLA3Q53S33 107 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 TCEAL5Q5H9L2 206 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 BRMS1LQ5PSV4 323 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 HECTD3Q5T447 861 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 TXNRD3NBQ6F5E7 133 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 TADA2BQ86TJ2 420 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 RBM23Q86U06 439 aaKnown RBP7.78□□□□□ -1.16
VPS45-213ENST00000618148 ELMOD1Q8N336 334 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 UBL4BQ8N7F7 174 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 EXD1Q8NHP7 514 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 OSBPL9Q96SU4 736 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 TUBB2BQ9BVA1 445 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 L2HGDHQ9H9P8 463 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 RRAGDQ9NQL2 400 aaPredicted RBP7.78□□□□□ -1.16
VPS45-213ENST00000618148 ASAH2Q9NR71 780 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 DDIT4Q9NX09 232 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 ZMYM5Q9UJ78 669 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 TTC7AQ9ULT0 858 aaPredicted RBP7.78□□□□□ -1.16
VPS45-213ENST00000618148 PACSIN2Q9UNF0 486 aaPredicted RBP7.78□□□□□ -1.16
VPS45-213ENST00000618148 MAGED2Q9UNF1 606 aaPredicted RBP7.78□□□□□ -1.16
VPS45-213ENST00000618148 TLR6Q9Y2C9 796 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 HBS1LQ9Y450 684 aaKnown RBP7.78□□□□□ -1.16
VPS45-213ENST00000618148 MTCH2Q9Y6C9 303 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 DENND4CQ5VZ89 1909 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 CLUHO75153 1309 aa7.78□□□□□ -1.16
VPS45-213ENST00000618148 C3orf70A6NLC5 250 aaPredicted RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 KCNU1A8MYU2 1149 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 I6L893 689 aaPredicted RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 CCL16O15467 120 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 COCHO43405 550 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 PRPSAP2O60256 369 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 MOSPD3O75425 235 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 HOXB8P17481 243 aaPredicted RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 PTPN2P17706 415 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 GTF2F1P35269 517 aaKnown RBP eCLIP7.77□□□□□ -1.17
VPS45-213ENST00000618148 CCR2P41597 374 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 KPNA1P52294 538 aaPredicted RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 ATXN1P54253 815 aaKnown RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 RWDD2BP57060 319 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 RBM10P98175 930 aaKnown RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 NRG1Q02297 640 aaPredicted RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 DEUP1Q05D60 604 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 SEMA3BQ13214 749 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 MTA1Q13330 715 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 ADAM15Q13444 863 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 TRIP4Q15650 581 aaPredicted RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 TAF12Q16514 161 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 DPYSL2Q16555 572 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 CDO1Q16878 200 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 PRSS36Q5K4E3 855 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 ARTNQ5T4W7 220 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 ZNF572Q7Z3I7 529 aaPredicted RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 RASGEF1CQ8N431 466 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 SHKBP1Q8TBC3 707 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 RNF139Q8WU17 664 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 PBKQ96KB5 322 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 FCRL2Q96LA5 508 aaPredicted RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 PRDM12Q9H4Q4 367 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 CCSER2Q9H7U1 834 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 FAM204AQ9H8W3 233 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 MTMR10Q9NXD2 777 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 ARHGEF38Q9NXL2 777 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 DDX56Q9NY93 547 aaKnown RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 MARCH2Q9P0N8 246 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 DNMT3BQ9UBC3 853 aaKnown RBP7.77□□□□□ -1.17
VPS45-213ENST00000618148 DNMT3LQ9UJW3 386 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 USTQ9Y2C2 406 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 EFR3BQ9Y2G0 817 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.77□□□□□ -1.17
VPS45-213ENST00000618148 SAR1BQ9Y6B6 198 aa7.77□□□□□ -1.17
VPS45-213ENST00000618148 CCDC195A0A1B0GUA6 201 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 C2orf78A6NCI8 922 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 MSI1O43347 362 aaKnown RBP7.76□□□□□ -1.17
VPS45-213ENST00000618148 TBX18O95935 607 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 RHOP08100 348 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 RARAP10276 462 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 SLC2A3P11169 496 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 DDX6P26196 483 aaKnown RBP eCLIP7.76□□□□□ -1.17
VPS45-213ENST00000618148 GABRR2P28476 465 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 WEE1P30291 646 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 CCR1P32246 355 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 GBP1P32455 592 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 ADRA1BP35368 520 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 ATP5C1P36542 298 aaKnown RBP7.76□□□□□ -1.17
VPS45-213ENST00000618148 ZNF135P52742 658 aaPredicted RBP7.76□□□□□ -1.17
VPS45-213ENST00000618148 COPS2P61201 443 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 SLC7A9P82251 487 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 PPP2R5EQ16537 467 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 SLC5A9Q2M3M2 681 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 C10orf120Q5SQS8 335 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 ERMARDQ5T6L9 678 aa7.76□□□□□ -1.17
VPS45-213ENST00000618148 ACBD5Q5T8D3 534 aaPredicted RBP7.76□□□□□ -1.17
VPS45-213ENST00000618148 ANKRD54Q6NXT1 300 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms