RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 GRAP2O75791 330 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 APBB3O95704 486 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 ERBB2P04626 1255 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 FYNP06241 537 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 CHRM1P11229 460 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 ATP1A3P13637 1013 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 HNRNPLP14866 589 aaKnown RBP eCLIP12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 CDK11BP21127 795 aaKnown RBP12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 CHKAP35790 457 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 WASP42768 502 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 KIR2DL1P43626 348 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 RPL34P49207 117 aaKnown RBP12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 DGKGP49619 791 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 TBX4P57082 545 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 POLR2FP61218 127 aaKnown RBP12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 NCAPHQ15003 741 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 SYCP1Q15431 976 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 TAF5Q15542 800 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 FYB2Q5VWT5 728 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 SYPL2Q5VXT5 272 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 EGFLAMQ63HQ2 1017 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 ANO7Q6IWH7 933 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 FAM183BPQ6ZVS7 135 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 CEP68Q76N32 757 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 TAC4Q86UU9 113 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 WDR5BQ86VZ2 330 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 WDTC1Q8N5D0 677 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 ZNF513Q8N8E2 541 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 ANKRD20A12PQ8NF67 263 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 CCDC26Q8TAB7 109 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 STK32AQ8WU08 396 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 PPP1R13BQ96KQ4 1090 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 PCMTD1Q96MG8 357 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 NAA15Q9BXJ9 866 aaKnown RBP12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 TPSD1Q9BZJ3 242 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 HSD3B7Q9H2F3 369 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 PDCL3Q9H2J4 239 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 NLRC4Q9NPP4 1024 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 RAB23Q9ULC3 237 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 PCDHGC3Q9UN70 934 aa12.4□□□□□ -0.42
PPP4R1-219ENST00000581250 SYNJ2BP-COX16A0A087WUM0 186 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 LGALS16A8MUM7 142 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 PRRT4C9JH25 899 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 AXIN1O15169 862 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 ADAM23O75077 832 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 GFPT2O94808 682 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 MOCS2O96007 188 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 PENKP01210 267 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 CYBBP04839 570 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 CYP11B1P15538 503 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 ZNF18P17022 549 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 TNFRSF4P43489 277 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 SGSHP51688 502 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 DGKEP52429 567 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 PITX1P78337 314 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 MRPS21P82921 87 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 UBXN1Q04323 297 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 SIM2Q14190 667 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 PTPN20Q4JDL3 420 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 OR6B2Q6IFH4 312 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 RFWD3Q6PCD5 774 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 TMEM110Q86TL2 294 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 NOP9Q86U38 636 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 DDI1Q8WTU0 396 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 SLC20A1Q8WUM9 679 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 NOX5Q96PH1 765 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 NAT10Q9H0A0 1025 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 SYNCQ9H7C4 482 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 COX16Q9P0S2 106 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 LIMA1Q9UHB6 759 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 CLEC4EQ9ULY5 219 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 INVSQ9Y283 1065 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 SIK3Q9Y2K2 1263 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 CEP83Q9Y592 693 aa12.39□□□□□ -0.43
PPP4R1-219ENST00000581250 RALGAPA1Q6GYQ0 2036 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 GOLGA6L7A0A1B0GV03 622 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 SYCE3A1L190 88 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 RPP40O75818 363 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 IGLV3-27P01718 113 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 HOXD9P28356 352 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 HOXA6P31267 233 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 BPIFB4P59827 614 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 PREPLQ4J6C6 727 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 DCAF6Q58WW2 860 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 NUGGCQ68CJ6 796 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 NUDT18Q6ZVK8 323 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 DHX40Q8IX18 779 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 FAM217AQ8IXS0 508 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 KIAA2013Q8IYS2 634 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 CPXM2Q8N436 756 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 CAMKK1Q8N5S9 505 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 EPS8L1Q8TE68 723 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 IPO4Q8TEX9 1081 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 HMGB4Q8WW32 186 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 RUBCNQ92622 972 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 FCRL2Q96LA5 508 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 SERPINB11Q96P15 392 aa12.38□□□□□ -0.43
PPP4R1-219ENST00000581250 ACOX2Q99424 681 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms