RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 CLIC5Q9NZA1 410 aa20.02■□□□□ 0.8
PKD1-230ENST00000565639 CXXC1Q9P0U4 656 aaPredicted RBP20.02■□□□□ 0.8
PKD1-230ENST00000565639 WHRNQ9P202 907 aa20.02■□□□□ 0.8
PKD1-230ENST00000565639 ASIC3Q9UHC3 531 aa20.02■□□□□ 0.8
PKD1-230ENST00000565639 KIAA1671Q9BY89 1806 aa20.02■□□□□ 0.79
PKD1-230ENST00000565639 H3BRJ5 948 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 SASH3O75995 380 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 LINC00271P0C7V0 271 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 KLRC2P26717 231 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 PGFP49763 221 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 VPS52Q8N1B4 723 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 PYROXD2Q8N2H3 581 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 PHOSPHO2Q8TCD6 241 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 FBXO32Q969P5 355 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 MAGEB5Q9BZ81 275 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 NEUROG2Q9H2A3 272 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 VIPAS39Q9H9C1 493 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.01■□□□□ 0.79
PKD1-230ENST00000565639 KRT14P02533 472 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 FAM153BP0C7A2 387 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 ATF2P15336 505 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 EIF3EP60228 445 aaKnown RBP20.01■□□□□ 0.79
PKD1-230ENST00000565639 RAB33AQ14088 237 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 FAM153CQ494X1 144 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 BRMS1LQ5PSV4 323 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 STKLD1Q8NE28 680 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 GPR152Q8TDT2 470 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 TTLL2Q9BWV7 592 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 TLR8Q9NR97 1041 aaKnown RBP20.01■□□□□ 0.79
PKD1-230ENST00000565639 GMIPQ9P107 970 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 FNIP2Q9P278 1114 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 FAM153AQ9UHL3 310 aa20.01■□□□□ 0.79
PKD1-230ENST00000565639 GREB1Q4ZG55 1949 aa20■□□□□ 0.79
PKD1-230ENST00000565639 GOT1P17174 413 aa20■□□□□ 0.79
PKD1-230ENST00000565639 ATF6P18850 670 aa20■□□□□ 0.79
PKD1-230ENST00000565639 ITIH2P19823 946 aa20■□□□□ 0.79
PKD1-230ENST00000565639 IVDP26440 423 aa20■□□□□ 0.79
PKD1-230ENST00000565639 HCAR3P49019 387 aa20■□□□□ 0.79
PKD1-230ENST00000565639 NR2C2P49116 596 aa20■□□□□ 0.79
PKD1-230ENST00000565639 CREMQ03060 361 aa20■□□□□ 0.79
PKD1-230ENST00000565639 CALCOCO2Q13137 446 aa20■□□□□ 0.79
PKD1-230ENST00000565639 SEMA3BQ13214 749 aa20■□□□□ 0.79
PKD1-230ENST00000565639 KCTD19Q17RG1 926 aaPredicted RBP20■□□□□ 0.79
PKD1-230ENST00000565639 ZDHHC24Q6UX98 284 aa20■□□□□ 0.79
PKD1-230ENST00000565639 HERC6Q8IVU3 1022 aa20■□□□□ 0.79
PKD1-230ENST00000565639 MREGQ8N565 214 aa20■□□□□ 0.79
PKD1-230ENST00000565639 SP7Q8TDD2 431 aaPredicted RBP20■□□□□ 0.79
PKD1-230ENST00000565639 SNF8Q96H20 258 aa20■□□□□ 0.79
PKD1-230ENST00000565639 SERPINB11Q96P15 392 aa20■□□□□ 0.79
PKD1-230ENST00000565639 RAD9AQ99638 391 aa20■□□□□ 0.79
PKD1-230ENST00000565639 TMPRSS4Q9NRS4 437 aa20■□□□□ 0.79
PKD1-230ENST00000565639 MRPL17Q9NRX2 175 aaKnown RBP20■□□□□ 0.79
PKD1-230ENST00000565639 OSER1Q9NX31 292 aa20■□□□□ 0.79
PKD1-230ENST00000565639 MAFFQ9ULX9 164 aa20■□□□□ 0.79
PKD1-230ENST00000565639 SLC4A7Q9Y6M7 1214 aa20■□□□□ 0.79
PKD1-230ENST00000565639 ZNF638Q14966 1978 aaKnown RBP20■□□□□ 0.79
PKD1-230ENST00000565639 SLC38A8A6NNN8 435 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 FGF18O76093 207 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 RBP3P10745 1247 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 TAF10Q12962 218 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 BBOF1Q8ND07 529 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 CASP10Q92851 521 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 ART4Q93070 314 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 GDAP1L1Q96MZ0 367 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 FMO2Q99518 471 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 TMEM121Q9BTD3 319 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 HTATIP2Q9BUP3 242 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 TKTL2Q9H0I9 626 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 ANLNQ9NQW6 1124 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 OLA1Q9NTK5 396 aaKnown RBP19.99■□□□□ 0.79
PKD1-230ENST00000565639 ARHGEF38Q9NXL2 777 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 SSX2IPQ9Y2D8 614 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 I6L893 689 aaPredicted RBP19.99■□□□□ 0.79
PKD1-230ENST00000565639 PLTPP55058 493 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 PPP2R5DQ14738 602 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 C1orf228Q6PIY5 440 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 NPNTQ6UXI9 565 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 RNF34Q969K3 372 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 OSBPL2Q9H1P3 480 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 PCDH9Q9HC56 1237 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 ARHGEF4Q9NR80 690 aa19.99■□□□□ 0.79
PKD1-230ENST00000565639 SGK1O00141 431 aa19.98■□□□□ 0.79
PKD1-230ENST00000565639 EEF2KO00418 725 aaKnown RBP19.98■□□□□ 0.79
PKD1-230ENST00000565639 LILRB3O75022 631 aa19.98■□□□□ 0.79
PKD1-230ENST00000565639 ZDHHC11BP0C7U3 371 aa19.98■□□□□ 0.79
PKD1-230ENST00000565639 STIP1P31948 543 aaKnown RBP19.98■□□□□ 0.79
PKD1-230ENST00000565639 CCR1P32246 355 aa19.98■□□□□ 0.79
PKD1-230ENST00000565639 ADCY8P40145 1251 aa19.98■□□□□ 0.79
PKD1-230ENST00000565639 CAV1Q03135 178 aa19.98■□□□□ 0.79
PKD1-230ENST00000565639 MTMR3Q13615 1198 aa19.98■□□□□ 0.79
PKD1-230ENST00000565639 TRIP13Q15645 432 aaPredicted RBP19.98■□□□□ 0.79
PKD1-230ENST00000565639 FBXO25Q8TCJ0 367 aa19.98■□□□□ 0.79
PKD1-230ENST00000565639 ZBP1Q9H171 429 aa19.98■□□□□ 0.79
PKD1-230ENST00000565639 MTIF3Q9H2K0 278 aaKnown RBP19.98■□□□□ 0.79
PKD1-230ENST00000565639 RXFP1Q9HBX9 757 aa19.98■□□□□ 0.79
PKD1-230ENST00000565639 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.98■□□□□ 0.79
PKD1-230ENST00000565639 SEC24AO95486 1093 aa19.97■□□□□ 0.79
PKD1-230ENST00000565639 AMPD1P23109 780 aa19.97■□□□□ 0.79
PKD1-230ENST00000565639 HSPA9P38646 679 aaKnown RBP19.97■□□□□ 0.79
PKD1-230ENST00000565639 XRCC4Q13426 336 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms