RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 A0A1W2PQH9 124 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 SLC9A3R1O14745 358 aaPredicted RBP16.41■□□□□ 0.22
USB1-208ENST00000563207 THAP12O43422 761 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 TLR5O60602 858 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 BRD2P25440 801 aaKnown RBP16.41■□□□□ 0.22
USB1-208ENST00000563207 KIR2DL1P43626 348 aaPredicted RBP16.41■□□□□ 0.22
USB1-208ENST00000563207 CRY1Q16526 586 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 PLA2G2CQ5R387 149 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 ZNF397Q8NF99 534 aaPredicted RBP16.41■□□□□ 0.22
USB1-208ENST00000563207 NETO1Q8TDF5 533 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 ACDQ96AP0 544 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 TRIM5Q9C035 493 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 TTYH3Q9C0H2 523 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 LHX5Q9H2C1 402 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 ARHGEF4Q9NR80 690 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 SH3BP1Q9Y3L3 701 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 SPTBN2O15020 2390 aa16.41■□□□□ 0.22
USB1-208ENST00000563207 NUP205Q92621 2012 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 ZNF806P0C7X5 589 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 CYP11B1P15538 503 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 FERP16591 822 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 KRT9P35527 623 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 MPLP40238 635 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 PLA2G4AP47712 749 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 TUBP50607 506 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 TRIM14Q14142 442 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 ANO4Q32M45 955 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 AASDHQ4L235 1098 aaPredicted RBP16.4■□□□□ 0.22
USB1-208ENST00000563207 SPECC1LQ69YQ0 1117 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 SCD5Q86SK9 330 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 SLC47A2Q86VL8 602 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 RASSF3Q86WH2 238 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 MIB1Q86YT6 1006 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 ETFBKMTQ8IXQ9 262 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 STK32AQ8WU08 396 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 SLC35F5Q8WV83 523 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 KCTD13Q8WZ19 329 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 EXOC4Q96A65 974 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 HSFY1Q96LI6 401 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 ZSWIM1Q9BR11 485 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 NACA2Q9H009 215 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 CYLDQ9NQC7 956 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 SPHK2Q9NRA0 654 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 TBC1D14Q9P2M4 693 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 CEP83Q9Y592 693 aa16.4■□□□□ 0.22
USB1-208ENST00000563207 MYO18AQ92614 2054 aaKnown RBP16.39■□□□□ 0.21
USB1-208ENST00000563207 A0A0A0MRY4 1105 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 PATE3B3GLJ2 98 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 M0QYV0 167 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 TULP3O75386 442 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 GFPT2O94808 682 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 ADH1CP00326 375 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 APODP05090 189 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 SDHBP21912 280 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 GBP1P32455 592 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 WASP42768 502 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 CREB5Q02930 508 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 PDE4CQ08493 712 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 PPM1JQ5JR12 505 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 DDX42Q86XP3 938 aaKnown RBP eCLIP16.39■□□□□ 0.21
USB1-208ENST00000563207 KIAA1958Q8N8K9 716 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 BAP1Q92560 729 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 SYN2Q92777 582 aaPredicted RBP16.39■□□□□ 0.21
USB1-208ENST00000563207 LOXL4Q96JB6 756 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 ACOX2Q99424 681 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 TLR8Q9NR97 1041 aaKnown RBP16.39■□□□□ 0.21
USB1-208ENST00000563207 AIPL1Q9NZN9 384 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 CAPN11Q9UMQ6 739 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 SCML2Q9UQR0 700 aa16.39■□□□□ 0.21
USB1-208ENST00000563207 TPM1P09493 284 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 PNMA6AP0CW24 399 aaPredicted RBP16.38■□□□□ 0.21
USB1-208ENST00000563207 RARGP13631 454 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 KCNA4P22459 653 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 GRIA2P42262 883 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 GPD2P43304 727 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 ACADSBP45954 432 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 KIF11P52732 1056 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 SNX16P57768 344 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 MRPS21P82921 87 aaKnown RBP16.38■□□□□ 0.21
USB1-208ENST00000563207 ZBED6P86452 979 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 GAD2Q05329 585 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 RAB41Q5JT25 222 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 TPGS1Q6ZTW0 290 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 TOGARAM2Q6ZUX3 1019 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 PIGZQ86VD9 579 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 VSTM4Q8IW00 320 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 C12orf50Q8NA57 414 aaPredicted RBP16.38■□□□□ 0.21
USB1-208ENST00000563207 UBA3Q8TBC4 463 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 EPS8L1Q8TE68 723 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 NDRG1Q92597 394 aaKnown RBP16.38■□□□□ 0.21
USB1-208ENST00000563207 BHMTQ93088 406 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 CNTNAP3BQ96NU0 1288 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 NOX5Q96PH1 765 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 CNTNAP3Q9BZ76 1288 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 LRRC4Q9HBW1 653 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 ACP6Q9NPH0 428 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.38■□□□□ 0.21
USB1-208ENST00000563207 LUC7L2Q9Y383 392 aaKnown RBP16.38■□□□□ 0.21
USB1-208ENST00000563207 USP3Q9Y6I4 520 aa16.38■□□□□ 0.21
USB1-208ENST00000563207 TBC1D3BA6NDS4 549 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms