RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 HSFX1Q9UBD0 423 aa14.3□□□□□ -0.12
TPM1-215ENST00000558868 COL4A4P53420 1690 aaPredicted RBP14.3□□□□□ -0.12
TPM1-215ENST00000558868 H7C0C1 242 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 SMAPO00193 183 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 PPFIA2O75334 1257 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 FGBP02675 491 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 ITGB8P26012 769 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 IVDP26440 423 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 YWHAQP27348 245 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 HTR7P34969 479 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 ACTN2P35609 894 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 ATP5OP48047 213 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 GLUD2P49448 558 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 PITX1P78337 314 aaPredicted RBP14.29□□□□□ -0.12
TPM1-215ENST00000558868 DEFB103AP81534 67 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 CREMQ03060 361 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 DHX9Q08211 1270 aaKnown RBP14.29□□□□□ -0.12
TPM1-215ENST00000558868 IFRD2Q12894 506 aaPredicted RBP14.29□□□□□ -0.12
TPM1-215ENST00000558868 DDR2Q16832 855 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 MGAT5BQ3V5L5 792 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 TPGS2Q68CL5 300 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 C1orf228Q6PIY5 440 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 LRIG3Q6UXM1 1119 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 C4orf22Q6V702 233 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 RNF19BQ6ZMZ0 732 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 DENND5BQ6ZUT9 1274 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 TAS1R1Q7RTX1 841 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 TMC3Q7Z5M5 1100 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 TMEM173Q86WV6 379 aaPredicted RBP14.29□□□□□ -0.12
TPM1-215ENST00000558868 COLGALT1Q8NBJ5 622 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 ATAD1Q8NBU5 361 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 FBXO25Q8TCJ0 367 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 SERPINB11Q96P15 392 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 YME1L1Q96TA2 773 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 FERMT1Q9BQL6 677 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 SMOC2Q9H3U7 446 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 RC3H2Q9HBD1 1191 aaKnown RBP14.29□□□□□ -0.12
TPM1-215ENST00000558868 WDR6Q9NNW5 1121 aaKnown RBP14.29□□□□□ -0.12
TPM1-215ENST00000558868 OLA1Q9NTK5 396 aaKnown RBP14.29□□□□□ -0.12
TPM1-215ENST00000558868 CWC15Q9P013 229 aaKnown RBP14.29□□□□□ -0.12
TPM1-215ENST00000558868 CALCOCO1Q9P1Z2 691 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 RAD54BQ9Y620 910 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 CDY1Q9Y6F8 540 aa14.29□□□□□ -0.12
TPM1-215ENST00000558868 FAM92AA1XBS5 289 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 BCLAF3A2AJT9 711 aaKnown RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 HACD1B0YJ81 288 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 EEF2KO00418 725 aaKnown RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 DNALI1O14645 258 aaPredicted RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 IFNB1P01574 187 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 IGLV3-25P01717 112 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 SLC2A3P11169 496 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 PECAM1P16284 738 aaPredicted RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 DSG1Q02413 1049 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 FPGSQ05932 587 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 GPS1Q13098 491 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 PPP2R5DQ14738 602 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 TRIP13Q15645 432 aaPredicted RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 P3H1Q32P28 736 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 IZUMO3Q5VZ72 239 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 FAM117BQ6P1L5 589 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 MSANTD2Q6P1R3 559 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 PRSS55Q6UWB4 352 aaPredicted RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 SCD5Q86SK9 330 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 DDX53Q86TM3 631 aaKnown RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 TAC4Q86UU9 113 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 TSEN2Q8NCE0 465 aaKnown RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 ADAM32Q8TC27 787 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 FBXO32Q969P5 355 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 SEPT5Q99719 369 aaPredicted RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 EPAS1Q99814 870 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 TMEM121Q9BTD3 319 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 OSBPL2Q9H1P3 480 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 TLR8Q9NR97 1041 aaKnown RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 CLIC5Q9NZA1 410 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 SAE1Q9UBE0 346 aaPredicted RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 AFF4Q9UHB7 1163 aaKnown RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 TPX2Q9ULW0 747 aaKnown RBP14.28□□□□□ -0.12
TPM1-215ENST00000558868 MAFFQ9ULX9 164 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 SSX2IPQ9Y2D8 614 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 PCDHB12Q9Y5F1 795 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 HEY1Q9Y5J3 304 aa14.28□□□□□ -0.12
TPM1-215ENST00000558868 A0A1W2PQH9 124 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 IRAK2O43187 625 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 URODP06132 367 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 ACRP10323 421 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 RARGP13631 454 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 GOT1P17174 413 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 CCR1P32246 355 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 OR1D2P34982 312 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 HSD17B3P37058 310 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 VPS41P49754 854 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 ITGA8P53708 1063 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 PMS2P54278 862 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 TPI1P60174 286 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 MTA1Q13330 715 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 MORF4L2Q15014 288 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 ACBD5Q5T8D3 534 aaPredicted RBP14.27□□□□□ -0.13
TPM1-215ENST00000558868 RHBDF2Q6PJF5 856 aa14.27□□□□□ -0.13
TPM1-215ENST00000558868 RSPO2Q6UXX9 243 aaPredicted RBP14.27□□□□□ -0.13
TPM1-215ENST00000558868 RFX8Q6ZV50 586 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms