RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RHOBTB2Q9BYZ6 727 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 CAB39LQ9H9S4 337 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 PHIPQ8WWQ0 1821 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 IGKV6-21A0A0C4DH24 114 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 GAS2O43903 313 aaKnown RBP14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 PROZP22891 400 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 AVPR1AP37288 418 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 FBXO47Q5MNV8 452 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 LCLAT1Q6UWP7 414 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 PIGZQ86VD9 579 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 CRLF3Q8IUI8 442 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 SPATA6LQ8N4H0 392 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 SMC1BQ8NDV3 1235 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 LPPQ93052 612 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 SLC7A6OSQ96CW6 309 aaPredicted RBP14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 KCTD15Q96SI1 283 aaPredicted RBP14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 GCOM2Q9BZD3 368 aaPredicted RBP14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 ATXN3LQ9H3M9 355 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 ZFATQ9P243 1243 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 PSAT1Q9Y617 370 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 RPS6KL1Q9Y6S9 549 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 SPTLC1O15269 473 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 APOEP02649 317 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 SMPD1P17405 629 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 SLC8A3P57103 927 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 OLFML1Q6UWY5 402 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 RAPH1Q70E73 1250 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 EXOC8Q8IYI6 725 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 APPL2Q8NEU8 664 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 MIPEPQ99797 713 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 NME7Q9Y5B8 376 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 TEX264Q9Y6I9 313 aa14.12□□□□□ -0.15
PRPF40B-209ENST00000548825 SSC5DA1L4H1 1573 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 GOLGA8QA0A0J9YX86 632 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 EME2A4GXA9 379 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 GOLGA8OA6NCC3 632 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 GOLGA8NF8WBI6 632 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 RNF103O00237 685 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 MFSD11O43934 449 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 BEST1O76090 585 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 MOCS2O96007 188 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 CDH5P33151 784 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 CFAP157Q5JU67 520 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 SYPL2Q5VXT5 272 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 DPY19L2Q6NUT2 758 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 HFE2Q6ZVN8 426 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 HOMEZQ8IX15 550 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 CSPG4P5Q96PW8 444 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 KCNK16Q96T55 309 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 CADM1Q9BY67 442 aaKnown RBP14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 NUP205Q92621 2012 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 SLC15A5A6NIM6 579 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 MAGEB2O15479 319 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 AFF1P51825 1210 aaKnown RBP14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 DLG2Q15700 870 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 ZNF484Q5JVG2 852 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 N4BP2L1Q5TBK1 243 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 WSCD1Q658N2 575 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 ZNF669Q96BR6 464 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 NSL1Q96IY1 281 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 CYP3A43Q9HB55 503 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 GBA2Q9HCG7 927 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 ITGA11Q9UKX5 1188 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 DNAJC16Q9Y2G8 782 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 SCN1AP35498 2009 aa14.11□□□□□ -0.15
PRPF40B-209ENST00000548825 CASTOR2A6NHX0 329 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 KPNA7A9QM74 516 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 DNAJC6O75061 913 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 LGR5O75473 907 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 NCAM1P13591 858 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 GJA5P36382 358 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 PTDSS1P48651 473 aaKnown RBP14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 CCNA1P78396 465 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 STX3Q13277 289 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 KCNJ11Q14654 390 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 FASTKD5Q7L8L6 764 aaKnown RBP14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 RASSF3Q86WH2 238 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 OR52K1Q8NGK4 314 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 FNIP1Q8TF40 1166 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 TFB1MQ8WVM0 346 aaKnown RBP14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 WDR60Q8WVS4 1066 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 TMEM40Q8WWA1 233 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 SGF29Q96ES7 293 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 OXNAD1Q96HP4 312 aaPredicted RBP14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 PRDM12Q9H4Q4 367 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 KANSL3Q9P2N6 904 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 ENO4A6NNW6 628 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 TPP1O14773 563 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 TREHO43280 583 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 GABBR2O75899 941 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 PDE5AO76074 875 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 PTPN4P29074 926 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 TKTP29401 623 aaKnown RBP14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 MSX2P35548 267 aaPredicted RBP14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 GCKP35557 465 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 SNAPC2Q13487 334 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 ASRGL1Q7L266 308 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 TDRPQ86YL5 185 aa14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 CDKL3Q8IVW4 592 aaPredicted RBP14.1□□□□□ -0.15
PRPF40B-209ENST00000548825 HTR3CQ8WXA8 447 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms