RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 RAD23BP54727 409 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 ANO4Q32M45 955 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 COBLL1Q53SF7 1204 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 MIB1Q86YT6 1006 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 TERB1Q8NA31 727 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 SLC4A11Q8NBS3 891 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 FBXL13Q8NEE6 735 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 ERLEC1Q96DZ1 483 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 P2RY11Q96G91 374 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 HEXIM2Q96MH2 286 aaKnown RBP12.47□□□□□ -0.41
GABPB1-206ENST00000543881 GSDMAQ96QA5 445 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 DUSP16Q9BY84 665 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.47□□□□□ -0.41
GABPB1-206ENST00000543881 SUSD2Q9UGT4 822 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 APOBEC2Q9Y235 224 aaKnown RBP12.47□□□□□ -0.41
GABPB1-206ENST00000543881 RAXQ9Y2V3 346 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 PCDHA5Q9Y5H7 936 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 USP3Q9Y6I4 520 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 PTPRBP23467 1997 aa12.47□□□□□ -0.41
GABPB1-206ENST00000543881 TRIM49BA6NDI0 452 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 EGFLAMQ63HQ2 1017 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 TOGARAM2Q6ZUX3 1019 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 CCDC186Q7Z3E2 898 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 CCDC150Q8NCX0 1101 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 COL26A1Q96A83 441 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 TMEM176AQ96HP8 235 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 ZNF419Q96HQ0 510 aaPredicted RBP12.46□□□□□ -0.41
GABPB1-206ENST00000543881 FAXDC2Q96IV6 333 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 BBC3Q96PG8 261 aaPredicted RBP12.46□□□□□ -0.41
GABPB1-206ENST00000543881 CD248Q9HCU0 757 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 RMND1Q9NWS8 449 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 NAGPAQ9UK23 515 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 COQ4Q9Y3A0 265 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 ACACAQ13085 2346 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 IGSF10Q6WRI0 2623 aa12.46□□□□□ -0.41
GABPB1-206ENST00000543881 GCN1Q92616 2671 aaKnown RBP12.46□□□□□ -0.41
GABPB1-206ENST00000543881 NDUFS2O75306 463 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 GNSP15586 552 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 TRIM21P19474 475 aaKnown RBP12.46□□□□□ -0.42
GABPB1-206ENST00000543881 MAOBP27338 520 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 DCAF17Q5H9S7 520 aaPredicted RBP12.46□□□□□ -0.42
GABPB1-206ENST00000543881 SYCP2LQ5T4T6 812 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 TCERG1LQ5VWI1 586 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 ARHGAP17Q68EM7 881 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 SDE2Q6IQ49 451 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 KLHDC10Q6PID8 442 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 Q6ZNB5 142 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 SLCO6A1Q86UG4 719 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 CHPFQ8IZ52 775 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 IPO4Q8TEX9 1081 aaKnown RBP12.46□□□□□ -0.42
GABPB1-206ENST00000543881 FOXJ1Q92949 421 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 CCDC34Q96HJ3 373 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 LRIG1Q96JA1 1093 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 ACOX2Q99424 681 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 CD93Q9NPY3 652 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 DNMT3LQ9UJW3 386 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 STARD13Q9Y3M8 1113 aa12.46□□□□□ -0.42
GABPB1-206ENST00000543881 GOLGA6L4A6NEF3 574 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 EIF4E1BA6NMX2 242 aaKnown RBP12.45□□□□□ -0.42
GABPB1-206ENST00000543881 NEDD8-MDP1E9PL57 170 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 TULP2O00295 520 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 SLC16A3O15427 465 aaKnown RBP12.45□□□□□ -0.42
GABPB1-206ENST00000543881 CACNG3O60359 315 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 STX10O60499 249 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 CBFA2T3O75081 653 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 STC2O76061 302 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 KLKB1P03952 638 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 TYRP14679 529 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
GABPB1-206ENST00000543881 PLA2G4AP47712 749 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 FKBP3Q00688 224 aaKnown RBP12.45□□□□□ -0.42
GABPB1-206ENST00000543881 GRIK2Q13002 908 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 WDR45BQ5MNZ6 344 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 C10orf120Q5SQS8 335 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 ISM2Q6H9L7 571 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 GRAMD4Q6IC98 578 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 TPGS1Q6ZTW0 290 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 GLRX5Q86SX6 157 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 PIGZQ86VD9 579 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 ZNF276Q8N554 614 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 SMARCE1Q969G3 411 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 SLC35C1Q96A29 364 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 MRGPRX1Q96LB2 322 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 BBS2Q9BXC9 721 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 ZDHHC5Q9C0B5 715 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 SLC6A17Q9H1V8 727 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 DNAJC17Q9NVM6 304 aaKnown RBP12.45□□□□□ -0.42
GABPB1-206ENST00000543881 MARK1Q9P0L2 795 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 PCOLCE2Q9UKZ9 415 aa12.45□□□□□ -0.42
GABPB1-206ENST00000543881 APC2O95996 2303 aa12.44□□□□□ -0.42
GABPB1-206ENST00000543881 SMG1Q96Q15 3661 aaKnown RBP12.44□□□□□ -0.42
GABPB1-206ENST00000543881 PRRT4C9JH25 899 aa12.44□□□□□ -0.42
GABPB1-206ENST00000543881 SMC2O95347 1197 aa12.44□□□□□ -0.42
GABPB1-206ENST00000543881 ZIC2O95409 532 aaPredicted RBP12.44□□□□□ -0.42
GABPB1-206ENST00000543881 CISD3P0C7P0 127 aa12.44□□□□□ -0.42
GABPB1-206ENST00000543881 NUCB2P80303 420 aa12.44□□□□□ -0.42
GABPB1-206ENST00000543881 CUL2Q13617 745 aa12.44□□□□□ -0.42
GABPB1-206ENST00000543881 BECN1Q14457 450 aa12.44□□□□□ -0.42
GABPB1-206ENST00000543881 RAB41Q5JT25 222 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms