RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 BEST1O76090 585 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 KCNK5O95279 499 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 NFATC1O95644 943 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 CYP17A1P05093 508 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 HNRNPLP14866 589 aaKnown RBP eCLIP9.86□□□□□ -0.83
VPS26B-207ENST00000532160 BCKDHBP21953 392 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 GNA15P30679 374 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 GBP1P32455 592 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 SOX5P35711 763 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 STAT1P42224 750 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 TUBB2AQ13885 445 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 ELF2Q15723 593 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 GOLGA7BQ2TAP0 167 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 SGO2Q562F6 1265 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 ANO7Q6IWH7 933 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 PSAPL1Q6NUJ1 521 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 VSTM1Q6UX27 236 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 DENND5BQ6ZUT9 1274 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 FAM35AQ86V20 835 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 FAM71AQ8IYT1 594 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 TTC39CQ8N584 583 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 MDGA1Q8NFP4 955 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 TSTD1Q8NFU3 115 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 UBA3Q8TBC4 463 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 UBE2Q2Q8WVN8 375 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 FAM81BQ96LP2 452 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 EDEM2Q9BV94 578 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 TUBB2BQ9BVA1 445 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 NUP58Q9BVL2 599 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 TTLL2Q9BWV7 592 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 RNF38Q9H0F5 515 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 SMPD4Q9NXE4 827 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 TRPM5Q9NZQ8 1165 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 METRNQ9UJH8 293 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 TSPAN16Q9UKR8 245 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 CNTN6Q9UQ52 1028 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 CPQQ9Y646 472 aa9.86□□□□□ -0.83
VPS26B-207ENST00000532160 FAM208BQ5VWN6 2430 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 TNRC6BQ9UPQ9 1833 aaKnown RBP9.85□□□□□ -0.83
VPS26B-207ENST00000532160 LNP1A1A4G5 178 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 ZNF840PA6NDX5 716 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 C4orf47A7E2U8 309 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 TULP2O00295 520 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 AP1G2O75843 785 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 RHOBTB1O94844 696 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 PAEPP09466 180 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 VDRP11473 427 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 ANXA13P27216 316 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 KRT9P35527 623 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 SLC6A11P48066 632 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 ADKP55263 362 aaKnown RBP9.85□□□□□ -0.83
VPS26B-207ENST00000532160 SLC7A9P82251 487 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 SHC2P98077 582 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 NR1H3Q13133 447 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 MAPRE1Q15691 268 aaKnown RBP9.85□□□□□ -0.83
VPS26B-207ENST00000532160 FIGNQ5HY92 759 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 PMS2CLQ68D20 193 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 NYAP1Q6ZVC0 841 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 NOP9Q86U38 636 aaKnown RBP9.85□□□□□ -0.83
VPS26B-207ENST00000532160 RASSF3Q86WH2 238 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 C12orf40Q86WS4 652 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 TTC30AQ86WT1 665 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 PASD1Q8IV76 773 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 CCAR2Q8N163 923 aaKnown RBP9.85□□□□□ -0.83
VPS26B-207ENST00000532160 CCDC33Q8N5R6 958 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 SLC20A1Q8WUM9 679 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 ZNF606Q8WXB4 792 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 KCNK16Q96T55 309 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 KRT82Q9NSB4 513 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 MMP17Q9ULZ9 603 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 CAPN11Q9UMQ6 739 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.85□□□□□ -0.83
VPS26B-207ENST00000532160 SPEGQ15772 3267 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 AKAP13Q12802 2813 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 PCNX2A6NKB5 2137 aa9.85□□□□□ -0.83
VPS26B-207ENST00000532160 MYH10P35580 1976 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 PLXND1Q9Y4D7 1925 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 ZFYVE26Q68DK2 2539 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 PATE3B3GLJ2 98 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 M0QYV0 167 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 O00370 1275 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 TRIM66O15016 1216 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 ARHGAP6O43182 974 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 OLFM2O95897 454 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 ABL1P00519 1130 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 OAS1P00973 400 aaKnown RBP9.84□□□□□ -0.83
VPS26B-207ENST00000532160 MMEP08473 750 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 CYP11B1P15538 503 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 PFKLP17858 780 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 PDE6CP51160 858 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 NOVA1P51513 510 aaKnown RBP9.84□□□□□ -0.83
VPS26B-207ENST00000532160 MAP3K7CLP57077 242 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 FAM193AP78312 1265 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 ZBED6P86452 979 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 PTK2Q05397 1052 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 IFRD2Q12894 506 aaPredicted RBP9.84□□□□□ -0.83
VPS26B-207ENST00000532160 TAF10Q12962 218 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 TBX2Q13207 712 aaPredicted RBP9.84□□□□□ -0.83
VPS26B-207ENST00000532160 ARID5BQ14865 1188 aa9.84□□□□□ -0.83
VPS26B-207ENST00000532160 DHCR24Q15392 516 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 849.2 ms