RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 EFHC2Q5JST6 749 aa17.46■□□□□ 0.39
SREK1-212ENST00000522912 VARS2Q5ST30 1063 aaKnown RBP17.46■□□□□ 0.39
SREK1-212ENST00000522912 FAM72AQ5TYM5 149 aa17.46■□□□□ 0.39
SREK1-212ENST00000522912 FAM72DQ6L9T8 149 aa17.46■□□□□ 0.39
SREK1-212ENST00000522912 KCNT2Q6UVM3 1135 aa17.46■□□□□ 0.39
SREK1-212ENST00000522912 FAM72BQ86X60 149 aa17.46■□□□□ 0.39
SREK1-212ENST00000522912 APBB2Q92870 758 aa17.46■□□□□ 0.39
SREK1-212ENST00000522912 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.46■□□□□ 0.39
SREK1-212ENST00000522912 ADAM28Q9UKQ2 775 aa17.46■□□□□ 0.39
SREK1-212ENST00000522912 LRFN2Q9ULH4 789 aa17.46■□□□□ 0.39
SREK1-212ENST00000522912 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.46■□□□□ 0.39
SREK1-212ENST00000522912 MYO16Q9Y6X6 1858 aa17.46■□□□□ 0.38
SREK1-212ENST00000522912 CREB3O43889 395 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 MNX1P50219 401 aaPredicted RBP17.45■□□□□ 0.38
SREK1-212ENST00000522912 SLC5A3P53794 718 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 CCL23P55773 120 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 PPP2R2AP63151 447 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 GUCY1A3Q02108 690 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 PPARDQ03181 441 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 SCAPQ12770 1279 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 PDIA2Q13087 525 aaKnown RBP17.45■□□□□ 0.38
SREK1-212ENST00000522912 HIF1AQ16665 826 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 SLC45A4Q5BKX6 768 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 MFSD5Q6N075 450 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 CENPUQ71F23 418 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 CDKL3Q8IVW4 592 aaPredicted RBP17.45■□□□□ 0.38
SREK1-212ENST00000522912 GPR62Q9BZJ7 368 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 MARCH5Q9NX47 278 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 PAK5Q9P286 719 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 SYN3O14994 580 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 MFSD11O43934 449 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 TCEA3O75764 348 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 DGKIO75912 1065 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 ABHD2P08910 425 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 SLC11A1P49279 550 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 PGFP49763 221 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 AIF1P55008 147 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 SEMA3BQ13214 749 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 DPYSQ14117 519 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 KCNJ11Q14654 390 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 TAC4Q86UU9 113 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 CCDC13Q8IYE1 715 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 ZBED8Q8IZ13 594 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 DCP1BQ8IZD4 617 aaKnown RBP17.45■□□□□ 0.38
SREK1-212ENST00000522912 B3GALT6Q96L58 329 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 SERPINB12Q96P63 405 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 OLFM3Q96PB7 478 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 QKIQ96PU8 341 aaKnown RBP eCLIP17.45■□□□□ 0.382e-14■■□□□ 12.1
SREK1-212ENST00000522912 COLEC11Q9BWP8 271 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 HIPK3Q9H422 1215 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 ABI2Q9NYB9 513 aaPredicted RBP17.45■□□□□ 0.38
SREK1-212ENST00000522912 SLC12A6Q9UHW9 1150 aa17.45■□□□□ 0.38
SREK1-212ENST00000522912 XPO7Q9UIA9 1087 aaKnown RBP17.45■□□□□ 0.38
SREK1-212ENST00000522912 ERICH4A6NGS2 130 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 EEF2KO00418 725 aaKnown RBP17.44■□□□□ 0.38
SREK1-212ENST00000522912 AGTP01019 485 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 ACTN2P35609 894 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 CXCR3P49682 368 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 ARL4CP56559 192 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 FAAP100Q0VG06 881 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 IFRD2Q12894 506 aaPredicted RBP17.44■□□□□ 0.38
SREK1-212ENST00000522912 MRPL58Q14197 206 aaKnown RBP17.44■□□□□ 0.38
SREK1-212ENST00000522912 FAM171A1Q5VUB5 890 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 LRRC31Q6UY01 552 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 SLC39A5Q6ZMH5 540 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 ANKRD33Q7Z3H0 272 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 CEP57Q86XR8 500 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 SCN4BQ8IWT1 228 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 ARFGAP2Q8N6H7 521 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 NETO2Q8NC67 525 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 CCDC110Q8TBZ0 833 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 DQX1Q8TE96 717 aaKnown RBP17.44■□□□□ 0.38
SREK1-212ENST00000522912 PRDM16Q9HAZ2 1276 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 MICAL3Q7RTP6 2002 aa17.44■□□□□ 0.38
SREK1-212ENST00000522912 E7ESA3 106 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 F9P00740 461 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 CXCL10P02778 98 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 ALDH2P05091 517 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 MDH1P40925 334 aaKnown RBP17.43■□□□□ 0.38
SREK1-212ENST00000522912 SYCP2LQ5T4T6 812 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 RFX8Q6ZV50 586 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 NPAS4Q8IUM7 802 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 ANKMY2Q8IV38 441 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 STKLD1Q8NE28 680 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 TTC25Q96NG3 672 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 WDR83Q9BRX9 315 aaKnown RBP17.43■□□□□ 0.38
SREK1-212ENST00000522912 PPP1R12CQ9BZL4 782 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 PHACTR1Q9C0D0 580 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 RAB6BQ9NRW1 208 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 CTNNAL1Q9UBT7 734 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 NR2E3Q9Y5X4 410 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 SMAPO00193 183 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 DCLK1O15075 740 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 CYP2C18P33260 490 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 YWHAGP61981 247 aaKnown RBP eCLIP17.43■□□□□ 0.38
SREK1-212ENST00000522912 STAT4Q14765 748 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 CTXN3Q4LDR2 81 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 SDHAF4Q5VUM1 108 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 BEND5Q7L4P6 421 aa17.43■□□□□ 0.38
SREK1-212ENST00000522912 SCD5Q86SK9 330 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms