RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	CPXCR1	Q8N123	301 aa		5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	CLEC4C	Q8WTT0	213 aa		5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	RSC1A1	Q92681	617 aa		5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	TRAPPC9	Q96Q05	1148 aa		5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	SNX18	Q96RF0	628 aa		5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	PAGR1	Q9BTK6	254 aa		5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	ELOVL1	Q9BW60	279 aa		5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	CIPC	Q9C0C6	399 aa		5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	IKZF4	Q9H2S9	585 aa		5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	ELAC1	Q9H777	363 aa	Known RBP	5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	RRN3	Q9NYV6	651 aa		5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	DMRT1	Q9Y5R6	373 aa		5.22	□□□□□ -1.57
CTNNA1-222	ENST00000520400	EIF3F	O00303	357 aa	Predicted RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	QSOX1	O00391	747 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	NPS	P0C0P6	89 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	CYP2D6	P10635	497 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	COPB1	P53618	953 aa	Known RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	ARL4C	P56559	192 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	RPL15	P61313	204 aa	Known RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	SUMO2	P61956	95 aa	Known RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	PDCL	Q13371	301 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	AAK1	Q2M2I8	961 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	ACSM6	Q6P461	480 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	NFRKB	Q6P4R8	1299 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	LVRN	Q6Q4G3	990 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	CYP26C1	Q6V0L0	522 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	KYAT3	Q6YP21	454 aa	Known RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	CPO	Q8IVL8	374 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	CCDC117	Q8IWD4	279 aa	Predicted RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	SFTPA1	Q8IWL2	248 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	FTSJ3	Q8IY81	847 aa	Known RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	FAM98A	Q8NCA5	519 aa	Known RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	SLC16A11	Q8NCK7	471 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	MAFA	Q8NHW3	353 aa	Predicted RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	GCC1	Q96CN9	775 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	LTV1	Q96GA3	475 aa	Predicted RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	UBXN10	Q96LJ8	280 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	PRRX2	Q99811	253 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	HERC2P3	Q9BVR0	1158 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	TWSG1	Q9GZX9	223 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	TAF1D	Q9H5J8	278 aa	Predicted RBP	5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	CDCP1	Q9H5V8	836 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	USP29	Q9HBJ7	922 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	RXFP3	Q9NSD7	469 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	ABHD10	Q9NUJ1	306 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	SEMA5B	Q9P283	1151 aa		5.21	□□□□□ -1.58
CTNNA1-222	ENST00000520400	CCDC151	A5D8V7	595 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	TMEM191C	A6NGB0	347 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	AGAP5	A6NIR3	686 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	TMPRSS11D	O60235	418 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	EXOC3	O60645	756 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	KRT38	O76015	456 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	DLD	P09622	509 aa	Known RBP	5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	MYCL	P12524	364 aa	Predicted RBP	5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	PAX3	P23760	479 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	IGHMBP2	P38935	993 aa	Known RBP	5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	PPM1F	P49593	454 aa	Predicted RBP	5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	CACNA2D1	P54289	1103 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	ANKRD40	Q6AI12	368 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	SYT13	Q7L8C5	426 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	MRGPRG	Q86SM5	289 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	ZNF354C	Q86Y25	554 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	C12orf76	Q8N812	135 aa	Predicted RBP	5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	TERB1	Q8NA31	727 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	SPPL3	Q8TCT6	385 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	HMGB4	Q8WW32	186 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	OVCA2	Q8WZ82	227 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	C3orf49	Q96BT1	292 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	ZCWPW1	Q9H0M4	648 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	CCDC134	Q9H6E4	229 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	CPNE5	Q9HCH3	593 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	G6PC2	Q9NQR9	355 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	KIF17	Q9P2E2	1029 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	TRPC5	Q9UL62	973 aa	Predicted RBP	5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	FZD4	Q9ULV1	537 aa		5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	C19orf53	Q9UNZ5	99 aa	Predicted RBP	5.2	□□□□□ -1.58
CTNNA1-222	ENST00000520400	LRRC3C	A6NJW4	275 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	FYB1	O15117	783 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	NKX2-8	O15522	239 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	RAMP2	O60895	175 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	PYGL	P06737	847 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	DGKQ	P52824	942 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	BIRC3	Q13489	604 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	SMAD1	Q15797	465 aa	Known RBP	5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	RFX8	Q6ZV50	586 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	RAB11FIP2	Q7L804	512 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	KRT27	Q7Z3Y8	459 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	AFG1L	Q8WV93	481 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	WDR60	Q8WVS4	1066 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	ASB12	Q8WXK4	309 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	PPM1E	Q8WY54	764 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	THAP4	Q8WY91	577 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	TBC1D5	Q92609	795 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	RUBCN	Q92622	972 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	VPS50	Q96JG6	964 aa		5.19	□□□□□ -1.58
CTNNA1-222	ENST00000520400	TIMP4	Q99727	224 aa		5.19	□□□□□ -1.58

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