RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 KIF17Q9P2E2 1029 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 ANKFY1Q9P2R3 1169 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 GRHPRQ9UBQ7 328 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZNF70Q9UC06 446 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 ANGPTL2Q9UKU9 493 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 IRAK3Q9Y616 596 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZZEF1O43149 2961 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 SPEGQ15772 3267 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 PIEZO2Q9H5I5 2752 aa5.32□□□□□ -1.56
HMGB1P23-201ENST00000518743 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 FAM234BA2RU67 622 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 EIF3FO00303 357 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 UNC5CO95185 931 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 MGAT1P26572 445 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 ACVR2AP27037 513 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 CSF2RBP32927 897 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 ATXN1P54253 815 aaKnown RBP5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 ATP2C1P98194 919 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 SIGLEC14Q08ET2 396 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 MAPKAPK3Q16644 382 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 TRIM71Q2Q1W2 868 aaKnown RBP5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 FAM160B1Q5W0V3 765 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 MRNIPQ6NTE8 343 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZNF529Q6P280 563 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 KLHL17Q6TDP4 642 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 USP37Q86T82 979 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 FITM2Q8N6M3 262 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 PCSK9Q8NBP7 692 aaKnown RBP5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 FBXO15Q8NCQ5 510 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 SDCCAG3Q96C92 435 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 RBM15Q96T37 977 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 KATNAL1Q9BW62 490 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZNF341Q9BYN7 854 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 CPEB1Q9BZB8 566 aaKnown RBP5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 REXO4Q9GZR2 422 aaKnown RBP5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 ENKD1Q9H0I2 346 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZBTB26Q9HCK0 441 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 IL23AQ9NPF7 189 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 WASH6PQ9NQA3 447 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 NCDNQ9UBB6 729 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 CAPN11Q9UMQ6 739 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 HDAC5Q9UQL6 1122 aa5.31□□□□□ -1.56
HMGB1P23-201ENST00000518743 MED23Q9ULK4 1368 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 MYOCOSA0A1B0GUC4 107 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZNF785A8K8V0 405 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 CXorf49A8MYA2 514 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 CXCL11O14625 94 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 SOAT2O75908 522 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 PIM1P11309 404 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 TPH1P17752 444 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 EGR1P18146 543 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 KRT9P35527 623 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 LIMS1P48059 325 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 CPT1AP50416 773 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 RRADP55042 308 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 HGFACQ04756 655 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 PIGFQ07326 219 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 ARHGEF7Q14155 803 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 SIM2Q14190 667 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 MFSD14BQ5SR56 506 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 ATPAF1Q5TC12 328 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 RETSATQ6NUM9 610 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 DOK3Q7L591 496 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 CCDC117Q8IWD4 279 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 SLC30A5Q8TAD4 765 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 SNRNP27Q8WVK2 155 aaKnown RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 LCORQ96JN0 433 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZNF668Q96K58 619 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 DIRC2Q96SL1 478 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 TCF25Q9BQ70 676 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 SYT3Q9BQG1 590 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 SPATA5L1Q9BVQ7 753 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 SORBS1Q9BX66 1292 aaKnown RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 TINAGL1Q9GZM7 467 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 MS4A7Q9GZW8 240 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 KIAA1683Q9H0B3 1180 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 SEPSECSQ9HD40 501 aaKnown RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 HELLSQ9NRZ9 838 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 TBC1D23Q9NUY8 699 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 TMOD4Q9NZQ9 345 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 XPR1Q9UBH6 696 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 SLC23A1Q9UHI7 598 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 SLC45A1Q9Y2W3 748 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 NR2E1Q9Y466 385 aa5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 DSPP15924 2871 aaKnown RBP5.3□□□□□ -1.56
HMGB1P23-201ENST00000518743 RALGAPA2Q2PPJ7 1873 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 TCRBV7S2A1N4TA0A589 114 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 SH3D21A4FU49 640 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 TBKBP1A7MCY6 615 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 COQ9O75208 318 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 DNAJB5O75953 348 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 IL1R1P14778 569 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 BTF3P20290 206 aaKnown RBP5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 GABRB3P28472 473 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 ELF1P32519 619 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 GCLCP48506 637 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 MCM2P49736 904 aa5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 ZNF135P52742 658 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P23-201ENST00000518743 UCP3P55916 312 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms