RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 MARK1Q9P0L2 795 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 USP36Q9P275 1121 aaKnown RBP9.7□□□□□ -0.86
PTPN20-216ENST00000506080 DKK4Q9UBT3 224 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 EIF2B4Q9UI10 523 aaKnown RBP9.7□□□□□ -0.86
PTPN20-216ENST00000506080 LSM7Q9UK45 103 aaKnown RBP9.7□□□□□ -0.86
PTPN20-216ENST00000506080 NUDT5Q9UKK9 219 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 BTBD3Q9Y2F9 522 aa9.7□□□□□ -0.86
PTPN20-216ENST00000506080 URB1O60287 2271 aaKnown RBP9.7□□□□□ -0.86
PTPN20-216ENST00000506080 FAM92AA1XBS5 289 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 METTL12A8MUP2 240 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 FLRT2O43155 660 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 PHACTR2O75167 634 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 CCDC130P13994 396 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 HOXD13P35453 343 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 ATP5C1P36542 298 aaKnown RBP9.69□□□□□ -0.86
PTPN20-216ENST00000506080 CSNK1EP49674 416 aaKnown RBP9.69□□□□□ -0.86
PTPN20-216ENST00000506080 TPMTP51580 245 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 CYP2J2P51589 502 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 MAP3K7CLP57077 242 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 CEBPZQ03701 1054 aaKnown RBP9.69□□□□□ -0.86
PTPN20-216ENST00000506080 ORC1Q13415 861 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 PSMD6Q15008 389 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 IL27RAQ6UWB1 636 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 CCDC73Q6ZRK6 1079 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 STXBP4Q6ZWJ1 553 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 ACOT1Q86TX2 421 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 FAM124AQ86V42 546 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 TMPRSS6Q8IU80 811 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 PDILTQ8N807 584 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 CADM4Q8NFZ8 388 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 JAKMIP2Q96AA8 810 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 SIPA1Q96FS4 1042 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 CDC6Q99741 560 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 XYLT2Q9H1B5 865 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTPN20-216ENST00000506080 COMMD8Q9NX08 183 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 OSER1Q9NX31 292 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 THAP10Q9P2Z0 257 aaPredicted RBP9.69□□□□□ -0.86
PTPN20-216ENST00000506080 NFE2L3Q9Y4A8 694 aa9.69□□□□□ -0.86
PTPN20-216ENST00000506080 SRPRBQ9Y5M8 271 aaKnown RBP9.69□□□□□ -0.86
PTPN20-216ENST00000506080 VPS37CA5D8V6 355 aaPredicted RBP9.68□□□□□ -0.86
PTPN20-216ENST00000506080 KCNK3O14649 394 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 CYP26A1O43174 497 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 SYNCRIPO60506 623 aaKnown RBP9.68□□□□□ -0.86
PTPN20-216ENST00000506080 DKK1O94907 266 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 NEFLP07196 543 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 ACADMP11310 421 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 ATICP31939 592 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 GOLGA8FQ08AF8 430 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 GOLGA8DPQ0D2H9 430 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 RABEP1Q15276 862 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 GEN1Q17RS7 908 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 FAM173BQ6P4H8 233 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 DBX2Q6ZNG2 339 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 GPRIN1Q7Z2K8 1008 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 NELFCDQ8IXH7 590 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 FUKQ8N0W3 1084 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 GALNT15Q8N3T1 639 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 PIP4K2CQ8TBX8 421 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 SLC2A14Q8TDB8 520 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 PRCCQ92733 491 aaPredicted RBP9.68□□□□□ -0.86
PTPN20-216ENST00000506080 SYAP1Q96A49 352 aaPredicted RBP9.68□□□□□ -0.86
PTPN20-216ENST00000506080 TNIP3Q96KP6 325 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 SDCBP2Q9H190 292 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 FBXO44Q9H4M3 255 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 AGPAT3Q9NRZ7 376 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 FAM49BQ9NUQ9 324 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 SLCO1B1Q9Y6L6 691 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 ASXL3Q9C0F0 2248 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 BPTFQ12830 3046 aa9.68□□□□□ -0.86
PTPN20-216ENST00000506080 A0A087WV48 116 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 A0A1W2PQH9 124 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 SIAH2O43255 324 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 TGFB1I1O43294 461 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 STAU1O95793 577 aaKnown RBP9.67□□□□□ -0.86
PTPN20-216ENST00000506080 RARGP13631 454 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 OXTRP30559 389 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 ABCG1P45844 678 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 CASP4P49662 377 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 COPAP53621 1224 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 MFAP3P55082 362 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 SH3BP2P78314 561 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 C19orf57Q0VDD7 668 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 BIRC3Q13489 604 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 SUZ12Q15022 739 aaKnown RBP9.67□□□□□ -0.86
PTPN20-216ENST00000506080 PTPRNQ16849 979 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 KIF19Q2TAC6 998 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 ZNF699Q32M78 642 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 ZNF667Q5HYK9 610 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 DHRS13Q6UX07 377 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 LAYNQ6UX15 382 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 EHBP1Q8NDI1 1231 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 C1orf216Q8TAB5 229 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 UBL7Q96S82 380 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-216ENST00000506080 NUP58Q9BVL2 599 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 GZF1Q9H116 711 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-216ENST00000506080 C6orf106Q9H6K1 298 aaPredicted RBP9.67□□□□□ -0.86
PTPN20-216ENST00000506080 NMUR1Q9HB89 426 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 ATP13A2Q9NQ11 1180 aa9.67□□□□□ -0.86
PTPN20-216ENST00000506080 CYLDQ9NQC7 956 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms