RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 ABCA7Q8IZY2 2146 aa16.55■□□□□ 0.24
GABPA-203ENST00000487266 CCDC163A0A0D9SF12 145 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 GOLGA6L22H0YM25 854 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 FOXN3O00409 490 aaPredicted RBP16.54■□□□□ 0.24
GABPA-203ENST00000487266 TSPAN3O60637 253 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 FBXO21O94952 628 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 NCAM1P13591 858 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 TGM1P22735 817 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 KLK7P49862 253 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 RAPGEF1Q13905 1077 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 CCDC6Q16204 474 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 GEN1Q17RS7 908 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 CDKAL1Q5VV42 579 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 RASSF3Q86WH2 238 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 FAM217AQ8IXS0 508 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 WDTC1Q8N5D0 677 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 C1orf131Q8NDD1 294 aaKnown RBP16.54■□□□□ 0.24
GABPA-203ENST00000487266 ENOX1Q8TC92 643 aaKnown RBP16.54■□□□□ 0.24
GABPA-203ENST00000487266 DQX1Q8TE96 717 aaKnown RBP16.54■□□□□ 0.24
GABPA-203ENST00000487266 SLC4A5Q9BY07 1137 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 EBF1Q9UH73 591 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 USP18Q9UMW8 372 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 NAALADL1Q9UQQ1 740 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 ZNF510Q9Y2H8 683 aa16.54■□□□□ 0.24
GABPA-203ENST00000487266 HBS1LQ9Y450 684 aaKnown RBP16.54■□□□□ 0.24
GABPA-203ENST00000487266 CEP250Q9BV73 2442 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 TCRBV21S2A2A0A5A6 115 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 IGLV3-27P01718 113 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 BCKDHBP21953 392 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 CLCN1P35523 988 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 CHKAP35790 457 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 PITX1P78337 314 aaPredicted RBP16.53■□□□□ 0.24
GABPA-203ENST00000487266 TAF5Q15542 800 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 EOGTQ5NDL2 527 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 SYPL2Q5VXT5 272 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 TAC4Q86UU9 113 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 CPXM2Q8N436 756 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 DDI1Q8WTU0 396 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 RLN3Q8WXF3 142 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 GOLGA1Q92805 767 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 RMDN1Q96DB5 314 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 FAM81BQ96LP2 452 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 CPXM1Q96SM3 734 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 FANCLQ9NW38 375 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 RAD54BQ9Y620 910 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 THADAQ6YHU6 1953 aa16.53■□□□□ 0.24
GABPA-203ENST00000487266 MUC22E2RYF6 1773 aaPredicted RBP16.52■□□□□ 0.24
GABPA-203ENST00000487266 GOLGA6L7A0A1B0GV03 622 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 HOXB2P14652 356 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 EEF1GP26641 437 aaKnown RBP16.52■□□□□ 0.24
GABPA-203ENST00000487266 HOXD9P28356 352 aaPredicted RBP16.52■□□□□ 0.24
GABPA-203ENST00000487266 SLC6A4P31645 630 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 HARS2P49590 506 aaKnown RBP16.52■□□□□ 0.24
GABPA-203ENST00000487266 DRAP1Q14919 205 aaPredicted RBP16.52■□□□□ 0.24
GABPA-203ENST00000487266 KRT31Q15323 416 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 STX1AQ16623 288 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 MEA1Q16626 185 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 KLHDC7AQ5VTJ3 777 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 KIAA1211LQ6NV74 962 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 RFWD3Q6PCD5 774 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 FRMD1Q8N878 549 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 HMGB4Q8WW32 186 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 MYEOVQ96EZ4 313 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 FCRL2Q96LA5 508 aaPredicted RBP16.52■□□□□ 0.24
GABPA-203ENST00000487266 VPS16Q9H269 839 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 CACNA2D2Q9NY47 1150 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 TMEM63CQ9P1W3 806 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 FBXO10Q9UK96 956 aa16.52■□□□□ 0.24
GABPA-203ENST00000487266 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.52■□□□□ 0.24
GABPA-203ENST00000487266 PLXND1Q9Y4D7 1925 aa16.52■□□□□ 0.23
GABPA-203ENST00000487266 NUP205Q92621 2012 aa16.52■□□□□ 0.23
GABPA-203ENST00000487266 WASH3PC4AMC7 463 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 GFRA2O00451 464 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 RETP07949 1114 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 ACADSBP45954 432 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 TBX4P57082 545 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 PLK5Q496M5 336 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 HSF5Q4G112 596 aaPredicted RBP16.51■□□□□ 0.23
GABPA-203ENST00000487266 PREPLQ4J6C6 727 aaPredicted RBP16.51■□□□□ 0.23
GABPA-203ENST00000487266 FAM133BQ5BKY9 247 aaKnown RBP16.51■□□□□ 0.23
GABPA-203ENST00000487266 CT47A1Q5JQC4 288 aaPredicted RBP16.51■□□□□ 0.23
GABPA-203ENST00000487266 CCDC183Q5T5S1 534 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 NADSYN1Q6IA69 706 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 SASS6Q6UVJ0 657 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 CACNA2D4Q7Z3S7 1137 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 TMEM110Q86TL2 294 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 FAM71AQ8IYT1 594 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 CHPFQ8IZ52 775 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 WFDC5Q8TCV5 224 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 STK32AQ8WU08 396 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 SORCS1Q8WY21 1168 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 NAA15Q9BXJ9 866 aaKnown RBP16.51■□□□□ 0.23
GABPA-203ENST00000487266 DUSP15Q9H1R2 295 aaPredicted RBP16.51■□□□□ 0.23
GABPA-203ENST00000487266 SLC6A17Q9H1V8 727 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 ARRDC1-AS1Q9H2J1 176 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 SMOC1Q9H4F8 434 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 BCCIPQ9P287 314 aaKnown RBP eCLIP16.51■□□□□ 0.23
GABPA-203ENST00000487266 XPO7Q9UIA9 1087 aaKnown RBP16.51■□□□□ 0.23
GABPA-203ENST00000487266 PCDHGC3Q9UN70 934 aa16.51■□□□□ 0.23
GABPA-203ENST00000487266 STARD13Q9Y3M8 1113 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms