RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 NDRG2Q9UN36 371 aaKnown RBP24.29■■□□□ 1.48
SUMO3-205ENST00000466861 LUC7L2Q9Y383 392 aaKnown RBP24.29■■□□□ 1.48
SUMO3-205ENST00000466861 MTF2Q9Y483 593 aaPredicted RBP24.29■■□□□ 1.48
SUMO3-205ENST00000466861 CALB1P05937 261 aa24.28■■□□□ 1.48
SUMO3-205ENST00000466861 MATKP42679 507 aa24.28■■□□□ 1.48
SUMO3-205ENST00000466861 PON2Q15165 354 aa24.28■■□□□ 1.48
SUMO3-205ENST00000466861 DCAF6Q58WW2 860 aa24.28■■□□□ 1.48
SUMO3-205ENST00000466861 SPECC1LQ69YQ0 1117 aa24.28■■□□□ 1.48
SUMO3-205ENST00000466861 DEFB106AQ8N104 65 aa24.28■■□□□ 1.48
SUMO3-205ENST00000466861 SLC39A13Q96H72 371 aa24.28■■□□□ 1.48
SUMO3-205ENST00000466861 PCDHB18PQ96TA0 734 aa24.28■■□□□ 1.48
SUMO3-205ENST00000466861 CHRDQ9H2X0 955 aa24.28■■□□□ 1.48
SUMO3-205ENST00000466861 HCN4Q9Y3Q4 1203 aa24.28■■□□□ 1.48
SUMO3-205ENST00000466861 IRAK2O43187 625 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 TRUB2O95900 331 aaKnown RBP24.27■■□□□ 1.48
SUMO3-205ENST00000466861 HMBSP08397 361 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 SLC2A3P11169 496 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 TNFAIP3P21580 790 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 GBP1P32455 592 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 SLC11A2P49281 568 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 KLHL30Q0D2K2 578 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 CCINQ13939 588 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 TAF5Q15542 800 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 TAC4Q86UU9 113 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 TMEM25Q86YD3 366 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 DENND1CQ8IV53 801 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 DTWD2Q8NBA8 298 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 VCPIP1Q96JH7 1222 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 DDX50Q9BQ39 737 aaKnown RBP24.27■■□□□ 1.48
SUMO3-205ENST00000466861 LMAN1LQ9HAT1 526 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 STAP1Q9ULZ2 295 aa24.27■■□□□ 1.48
SUMO3-205ENST00000466861 SCAMP3O14828 347 aaKnown RBP24.26■■□□□ 1.47
SUMO3-205ENST00000466861 MSI1O43347 362 aaKnown RBP24.26■■□□□ 1.47
SUMO3-205ENST00000466861 GYPCP04921 128 aa24.26■■□□□ 1.47
SUMO3-205ENST00000466861 DCNP07585 359 aaKnown RBP24.26■■□□□ 1.47
SUMO3-205ENST00000466861 OPRD1P41143 372 aa24.26■■□□□ 1.47
SUMO3-205ENST00000466861 GALK1P51570 392 aa24.26■■□□□ 1.47
SUMO3-205ENST00000466861 C1QBPQ07021 282 aaKnown RBP24.26■■□□□ 1.47
SUMO3-205ENST00000466861 PTP4A2Q12974 167 aa24.26■■□□□ 1.47
SUMO3-205ENST00000466861 ADGRF1Q5T601 910 aa24.26■■□□□ 1.47
SUMO3-205ENST00000466861 FAM102AQ5T9C2 384 aaPredicted RBP24.26■■□□□ 1.47
SUMO3-205ENST00000466861 ACAD10Q6JQN1 1059 aa24.26■■□□□ 1.47
SUMO3-205ENST00000466861 ETFBKMTQ8IXQ9 262 aa24.26■■□□□ 1.47
SUMO3-205ENST00000466861 NT5C3BQ969T7 300 aa24.26■■□□□ 1.47
SUMO3-205ENST00000466861 PGAP3Q96FM1 320 aaPredicted RBP24.26■■□□□ 1.47
SUMO3-205ENST00000466861 FCRL2Q96LA5 508 aaPredicted RBP24.26■■□□□ 1.47
SUMO3-205ENST00000466861 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.26■■□□□ 1.47
SUMO3-205ENST00000466861 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.26■■□□□ 1.47
SUMO3-205ENST00000466861 ADAM22Q9P0K1 906 aa24.26■■□□□ 1.47
SUMO3-205ENST00000466861 A0A0A0MRY4 1105 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 GALR2O43603 387 aaPredicted RBP24.25■■□□□ 1.47
SUMO3-205ENST00000466861 CACNG3O60359 315 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 CYBBP04839 570 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 GZMAP12544 262 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 E4F1Q66K89 784 aaPredicted RBP24.25■■□□□ 1.47
SUMO3-205ENST00000466861 FSTL4Q6MZW2 842 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 MMS22LQ6ZRQ5 1243 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 VSTM4Q8IW00 320 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 DRC7Q8IY82 874 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 XPO6Q96QU8 1125 aaKnown RBP24.25■■□□□ 1.47
SUMO3-205ENST00000466861 BBS2Q9BXC9 721 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 IRF2BPLQ9H1B7 796 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 HAUS4Q9H6D7 363 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 SEPT11Q9NVA2 429 aaKnown RBP24.25■■□□□ 1.47
SUMO3-205ENST00000466861 TMEM59LQ9UK28 342 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 KIAA1549LQ6ZVL6 1849 aa24.25■■□□□ 1.47
SUMO3-205ENST00000466861 GFRA2O00451 464 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 F9P00740 461 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 PENKP01210 267 aaPredicted RBP24.24■■□□□ 1.47
SUMO3-205ENST00000466861 APOEP02649 317 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 HNRNPH3P31942 346 aaKnown RBP24.24■■□□□ 1.47
SUMO3-205ENST00000466861 ANO4Q32M45 955 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 NUDT18Q6ZVK8 323 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 MON1BQ7L1V2 547 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 SLC30A5Q8TAD4 765 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 PNKPQ96T60 521 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 NPY6RQ99463 290 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 C11orf70Q9BRQ4 267 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 SLC12A6Q9UHW9 1150 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 PAXBP1Q9Y5B6 917 aa24.24■■□□□ 1.47
SUMO3-205ENST00000466861 CACNA1IQ9P0X4 2223 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 ACSL4O60488 711 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 GRAP2O75791 330 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 SERPING1P05155 500 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 TPM1P09493 284 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 TYRP14679 529 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 PPP2R5DQ14738 602 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 ARID5BQ14865 1188 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 SLC25A52Q3SY17 297 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 MPPE1Q53F39 396 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 MPP7Q5T2T1 576 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 ZNF571Q7Z3V5 609 aaPredicted RBP24.23■■□□□ 1.47
SUMO3-205ENST00000466861 VPS36Q86VN1 386 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 ATP6V0D2Q8N8Y2 350 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 OLIG1Q8TAK6 271 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 BTN2A3PQ96KV6 586 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 FAM204AQ9H8W3 233 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 DDIT4Q9NX09 232 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 DEC1Q9P2X7 70 aa24.23■■□□□ 1.47
SUMO3-205ENST00000466861 FBXO10Q9UK96 956 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms