RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	ZSWIM1	Q9BR11	485 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	FUCA2	Q9BTY2	467 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	NMUR1	Q9HB89	426 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	ARHGEF4	Q9NR80	690 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	SPHK2	Q9NRA0	654 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	VPS45	Q9NRW7	570 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	OSER1	Q9NX31	292 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	CEP83	Q9Y592	693 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	USP3	Q9Y6I4	520 aa		13.31	□□□□□ -0.28
FDPS-204	ENST00000461507	DCDC2B	A2VCK2	349 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	FOXN3	O00409	490 aa	Predicted RBP	13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	TM4SF5	O14894	197 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	CACNG3	O60359	315 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	TULP3	O75386	442 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	RHOBTB1	O94844	696 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	TBX18	O95935	607 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	HMBS	P08397	361 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	ATP5C1	P36542	298 aa	Known RBP	13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	PLA2G4A	P47712	749 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	PSEN1	P49768	467 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	SEC13	P55735	322 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	YWHAG	P61981	247 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	KDSR	Q06136	332 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	EFEMP1	Q12805	493 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	SF3A2	Q15428	464 aa	Known RBP	13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	TMEM92	Q6UXU6	159 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507		Q6ZNB5	142 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	SLC47A2	Q86VL8	602 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	ALLC	Q8N6M5	410 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	TERB1	Q8NA31	727 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	MDGA1	Q8NFP4	955 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	RNF139	Q8WU17	664 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	ZNF606	Q8WXB4	792 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	TSPY26P	Q9H489	355 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	SYNC	Q9H7C4	482 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	PLCB1	Q9NQ66	1216 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	CLIC5	Q9NZA1	410 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	EPG5	Q9HCE0	2579 aa		13.3	□□□□□ -0.28
FDPS-204	ENST00000461507	BCLAF3	A2AJT9	711 aa	Known RBP	13.29	□□□□□ -0.28
FDPS-204	ENST00000461507		F8VZ95	297 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	SGK1	O00141	431 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	DCLK1	O15075	740 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	ADAM23	O75077	832 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	GFPT2	O94808	682 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	KLF8	O95600	359 aa	Predicted RBP	13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	ADRB1	P08588	477 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	BPIFB4	P59827	614 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	ARID5A	Q03989	594 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	PREPL	Q4J6C6	727 aa	Predicted RBP	13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	USP39	Q53GS9	565 aa	Known RBP	13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	EOGT	Q5NDL2	527 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	ANO7	Q6IWH7	933 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	PMF1	Q6P1K2	205 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	SCD5	Q86SK9	330 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	TMEM25	Q86YD3	366 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	CCDC33	Q8N5R6	958 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	TXNDC5	Q8NBS9	432 aa	Known RBP	13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	DDX1	Q92499	740 aa	Known RBP	13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	EDEM1	Q92611	657 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	FAM149B1	Q96BN6	582 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	NOX5	Q96PH1	765 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	STK33	Q9BYT3	514 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	UBXN6	Q9BZV1	441 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	GAN	Q9H2C0	597 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	HSD3B7	Q9H2F3	369 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	SEPT11	Q9NVA2	429 aa	Known RBP	13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	DNMT3L	Q9UJW3	386 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	LSM7	Q9UK45	103 aa	Known RBP	13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	HCN2	Q9UL51	889 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	STRIP2	Q9ULQ0	834 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	CNTN6	Q9UQ52	1028 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	STARD13	Q9Y3M8	1113 aa		13.29	□□□□□ -0.28
FDPS-204	ENST00000461507	CAVIN2	O95810	425 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	P2RY2	P41231	377 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	ACADSB	P45954	432 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	IQCB1	Q15051	598 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	AASDH	Q4L235	1098 aa	Predicted RBP	13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	RAB41	Q5JT25	222 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	C12orf50	Q8NA57	414 aa	Predicted RBP	13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	RNF214	Q8ND24	703 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	C1orf131	Q8NDD1	294 aa	Known RBP	13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	IPO4	Q8TEX9	1081 aa	Known RBP	13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	CLEC4C	Q8WTT0	213 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	KCTD13	Q8WZ19	329 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	TPSD1	Q9BZJ3	242 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	CD248	Q9HCU0	757 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	CNGB3	Q9NQW8	809 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	RXFP3	Q9NSD7	469 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	DEC1	Q9P2X7	70 aa		13.28	□□□□□ -0.28
FDPS-204	ENST00000461507	CEP192	Q8TEP8	1941 aa		13.27	□□□□□ -0.28
FDPS-204	ENST00000461507	SLC12A8	A0AV02	714 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507		E5RJQ4	531 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	CAPN9	O14815	690 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	EPHB6	O15197	1021 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	TEX33	O43247	280 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	ALDH1A2	O94788	518 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	FBXO21	O94952	628 aa		13.27	□□□□□ -0.29
FDPS-204	ENST00000461507	BCKDHB	P21953	392 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms