RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 LMBRD1Q9NUN5 540 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 BCCIPQ9P287 314 aaKnown RBP eCLIP19.76■□□□□ 0.75
COL5A1-203ENST00000460264 SLC27A6Q9Y2P4 619 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 PCDHGA5Q9Y5G8 931 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 DNAH14Q0VDD8 3507 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 BECN2A8MW95 431 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 FOXD2O60548 495 aaPredicted RBP19.75■□□□□ 0.75
COL5A1-203ENST00000460264 RHOBTB1O94844 696 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 CYBBP04839 570 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 SDHBP21912 280 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 BCKDHBP21953 392 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 ERCC5P28715 1186 aaPredicted RBP19.75■□□□□ 0.75
COL5A1-203ENST00000460264 GBP1P32455 592 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 RPL34P49207 117 aaKnown RBP19.75■□□□□ 0.75
COL5A1-203ENST00000460264 FOXK2Q01167 660 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 CCDC6Q16204 474 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 MAN2A1Q16706 1144 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 PMS2CLQ68D20 193 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 C11orf74Q86VG3 221 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 MIS12Q9H081 205 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 ACP6Q9NPH0 428 aa19.75■□□□□ 0.75
COL5A1-203ENST00000460264 A0A1W2PQF6 199 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 THAP12O43422 761 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 MED7O43513 233 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 LATS1O95835 1130 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 IGLV3-27P01718 113 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 PON1P27169 355 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 GNA15P30679 374 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 MPLP40238 635 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 P2RY2P41231 377 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 WASP42768 502 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 SF3A2Q15428 464 aaKnown RBP19.74■□□□□ 0.75
COL5A1-203ENST00000460264 ARHGAP44Q17R89 818 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 PLA2G2CQ5R387 149 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 DGLUCYQ7Z3D6 616 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 FAM114A1Q8IWE2 563 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 CHPFQ8IZ52 775 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 ZNF606Q8WXB4 792 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 SHC3Q92529 594 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 GOLGA1Q92805 767 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 GABRG3Q99928 467 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 CD248Q9HCU0 757 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 ST7Q9NRC1 585 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 DACH1Q9UI36 760 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 STOML2Q9UJZ1 356 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 CEP192Q8TEP8 1941 aa19.74■□□□□ 0.75
COL5A1-203ENST00000460264 GFRA2O00451 464 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 ZNF806P0C7X5 589 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 GABRG2P18507 467 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 GEN1Q17RS7 908 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 SCUBE3Q8IX30 993 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 NETO1Q8TDF5 533 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 DDI1Q8WTU0 396 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 STK32AQ8WU08 396 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 RLN3Q8WXF3 142 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 PIWIL1Q96J94 861 aaKnown RBP19.73■□□□□ 0.75
COL5A1-203ENST00000460264 SLC4A5Q9BY07 1137 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 SIX2Q9NPC8 291 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 CACNA2D2Q9NY47 1150 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 CYTH4Q9UIA0 394 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 AJAP1Q9UKB5 411 aaPredicted RBP19.73■□□□□ 0.75
COL5A1-203ENST00000460264 CLEC4EQ9ULY5 219 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 CKAP5Q14008 2032 aa19.73■□□□□ 0.75
COL5A1-203ENST00000460264 MUC22E2RYF6 1773 aaPredicted RBP19.72■□□□□ 0.75
COL5A1-203ENST00000460264 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.72■□□□□ 0.75
COL5A1-203ENST00000460264 SART1O43290 800 aaKnown RBP19.72■□□□□ 0.75
COL5A1-203ENST00000460264 GDF9O60383 454 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 FYNP06241 537 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 LAMA1P25391 3075 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 HOXD9P28356 352 aaPredicted RBP19.72■□□□□ 0.75
COL5A1-203ENST00000460264 USP8P40818 1118 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 ACADSBP45954 432 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 ATXN1P54253 815 aaKnown RBP19.72■□□□□ 0.75
COL5A1-203ENST00000460264 ZNF445P59923 1031 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 MAP7D1Q3KQU3 841 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 HSP90AA4PQ58FG1 418 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 MIIPQ5JXC2 388 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 ADGRF1Q5T601 910 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 SDE2Q6IQ49 451 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 ANKS1BQ7Z6G8 1248 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 PGBD3Q8N328 593 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 SPACA7Q96KW9 195 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 TUBGCP2Q9BSJ2 902 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 SLC2A11Q9BYW1 496 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 NDST4Q9H3R1 872 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 SMOC1Q9H4F8 434 aa19.72■□□□□ 0.75
COL5A1-203ENST00000460264 BCLAF3A2AJT9 711 aaKnown RBP19.71■□□□□ 0.75
COL5A1-203ENST00000460264 E5RJQ4 531 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 NCAM1P13591 858 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 PRKCSHP14314 528 aaPredicted RBP19.71■□□□□ 0.75
COL5A1-203ENST00000460264 CREB5Q02930 508 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 RING1Q06587 406 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 VWA3BQ502W6 1294 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 MPPE1Q53F39 396 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 NUGGCQ68CJ6 796 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 KIAA1211LQ6NV74 962 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 FRMD1Q8N878 549 aa19.71■□□□□ 0.75
COL5A1-203ENST00000460264 C12orf50Q8NA57 414 aaPredicted RBP19.71■□□□□ 0.75
COL5A1-203ENST00000460264 DQX1Q8TE96 717 aaKnown RBP19.71■□□□□ 0.75
COL5A1-203ENST00000460264 IPO4Q8TEX9 1081 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms