RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 TRAF6Q9Y4K3 522 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ZNF236Q9UL36 1845 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 MYMKA6NI61 221 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 SPDYE3A6NKU9 549 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 POTECB2RU33 542 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 GCOM1H8Y6P7 765 aaPredicted RBP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 RRP8O43159 456 aaKnown RBP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 TSPAN1O60635 241 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 TBX10O75333 385 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 PSMD10O75832 226 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 HNRNPA1P09651 372 aaKnown RBP eCLIP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ACRP10323 421 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 GHRP10912 638 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ALADP13716 330 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 TECP42680 631 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ARHGDIBP52566 201 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 RNASE9P60153 205 aaKnown RBP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 MC1RQ01726 317 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 PLS1Q14651 629 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 KRT31Q15323 416 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 TBCCQ15814 346 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 HFEQ30201 348 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 CYP4A22Q5TCH4 519 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 CEP135Q66GS9 1140 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 LRIG3Q6UXM1 1119 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 SAMD7Q7Z3H4 446 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ZDHHC17Q8IUH5 632 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 C10orf67Q8IYJ2 551 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 SCYL3Q8IZE3 742 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 SYT2Q8N9I0 419 aaPredicted RBP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 REPS2Q8NFH8 660 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 RDM1Q8NG50 284 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 OR2W6PQ8NHA6 318 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ACER1Q8TDN7 264 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 SNX29Q8TEQ0 813 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ST8SIA4Q92187 359 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 KLRG1Q96E93 195 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 NUP58Q9BVL2 599 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 IRX2Q9BZI1 471 aaPredicted RBP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 REXO4Q9GZR2 422 aaKnown RBP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 TMEM39BQ9GZU3 492 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ISCUQ9H1K1 167 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 C1orf21Q9H246 121 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 MVB12BQ9H7P6 319 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 TMEM206Q9H813 350 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 SAMSN1Q9NSI8 373 aaKnown RBP8.11□□□□□ -1.11
BRCC3-208ENST00000453705 PCDHA12Q9UN75 941 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 L1RE1Q9UN81 338 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 CTNND2Q9UQB3 1225 aa8.11□□□□□ -1.11
BRCC3-208ENST00000453705 ENO4A6NNW6 628 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 PP2D1A8MPX8 630 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 DCDC2CA8MYV0 355 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 FAM227AF5H4B4 570 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 MEIS1O00470 390 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 KRIT1O00522 736 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 TUSC2O75896 110 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 UBXN7O94888 489 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 INHBAP08476 426 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 MAPTP10636 758 aaKnown RBP8.1□□□□□ -1.11
BRCC3-208ENST00000453705 GSTT1P30711 240 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 ACTR1AP61163 376 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 TUBA1BP68363 451 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 MAPK7Q13164 816 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 CBX3Q13185 183 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 EDRF1Q3B7T1 1238 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 HSP90AA5PQ58FG0 334 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 DARS2Q6PI48 645 aaKnown RBP8.1□□□□□ -1.11
BRCC3-208ENST00000453705 FBXO38Q6PIJ6 1188 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 TUBA1AQ71U36 451 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 SZRD1Q7Z422 152 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 CNGA4Q8IV77 575 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 ZNF565Q8N9K5 539 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 KIAA0895Q8NCT3 520 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 CLEC4DQ8WXI8 215 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 TCF12Q99081 682 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 SIKE1Q9BRV8 207 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 ERP44Q9BS26 406 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 TIPINQ9BVW5 301 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 WDR11Q9BZH6 1224 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 SMARCAD1Q9H4L7 1026 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 ADARB2Q9NS39 739 aaKnown RBP8.1□□□□□ -1.11
BRCC3-208ENST00000453705 FBXO40Q9UH90 709 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 HACL1Q9UJ83 578 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 SCAF8Q9UPN6 1271 aaKnown RBP8.1□□□□□ -1.11
BRCC3-208ENST00000453705 SIK3Q9Y2K2 1263 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 PCDHGA1Q9Y5H4 931 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 FHOD1Q9Y613 1164 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 ZSWIM8A7E2V4 1837 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 PHLPP2Q6ZVD8 1323 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 CCDC169A6NNP5 214 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 KCNJ18B7U540 433 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 PTBP3O95758 552 aaKnown RBP8.1□□□□□ -1.11
BRCC3-208ENST00000453705 GNA14O95837 355 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 OPN1MWP04001 364 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 OPN1MW2P0DN77 364 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 OPN1MW3P0DN78 364 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 HNRNPH3P31942 346 aaKnown RBP8.1□□□□□ -1.11
BRCC3-208ENST00000453705 PITPNBP48739 271 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 HSPA7P48741 367 aa8.1□□□□□ -1.11
BRCC3-208ENST00000453705 SCNN1GP51170 649 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms