RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 LAPTM5Q13571 262 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 DLG2Q15700 870 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 C5orf22Q49AR2 442 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 IGSF11Q5DX21 431 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 MDH1BQ5I0G3 518 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 GPR107Q5VW38 600 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 C11orf63Q6NUN7 778 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 ANKS1BQ7Z6G8 1248 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 GPBP1Q86WP2 473 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 SLC13A5Q86YT5 568 aaPredicted RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 FANCBQ8NB91 859 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 SLC2A14Q8TDB8 520 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 SH3YL1Q96HL8 342 aaPredicted RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 TUBA1CQ9BQE3 449 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 ZSWIM1Q9BR11 485 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 MXD3Q9BW11 206 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 TARS2Q9BW92 718 aaKnown RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 NOL6Q9H6R4 1146 aaKnown RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 EPB41L4AQ9HCS5 686 aaPredicted RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 PARVAQ9NVD7 372 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 KLQ9UEF7 1012 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 ST14Q9Y5Y6 855 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 LRRIQ4A6NIV6 560 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 MEI4A8MW99 385 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 FAM155AB1AL88 458 aaPredicted RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 FAM25AB3EWG3 89 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 FAM25CB3EWG5 89 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 FAM25GB3EWG6 89 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 RNASEH2AO75792 299 aaKnown RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 PAHP00439 452 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 KRT8P05787 483 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 S100A6P06703 90 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 DHRS4L1P0CG22 281 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 ATF2P15336 505 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 ZNF182P17025 639 aaPredicted RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 OR3A3P47888 321 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 ETV1P50549 477 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 COPAP53621 1224 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 TARDBPQ13148 414 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 SQLEQ14534 574 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 HERC3Q15034 1050 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 SIX1Q15475 284 aaPredicted RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 ATG16L1Q676U5 607 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 DSG4Q86SJ6 1040 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 BEND7Q8N7W2 519 aaPredicted RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 HIPK4Q8NE63 616 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 LHFPL5Q8TAF8 219 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 WNT8AQ9H1J5 351 aa11.06□□□□□ -0.64
LINC00342-202ENST00000448494 PSMC3IPQ9P2W1 217 aaPredicted RBP11.06□□□□□ -0.64
LINC00342-202ENST00000448494 PNMA6FA0A0J9YX94 578 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 GSTTP1A0A1W2PQM5 241 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 PDPK1O15530 556 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 ANXA1P04083 346 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 ATF6P18850 670 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 MAP4P27816 1152 aaKnown RBP11.05□□□□□ -0.64
LINC00342-202ENST00000448494 STAT3P40763 770 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 LEXMQ3ZCV2 418 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 ESCO1Q5FWF5 840 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 RALGPS1Q5JS13 557 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 ARMC8Q8IUR7 673 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 GRIN3AQ8TCU5 1115 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 TCP10LQ8TDR4 215 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 GRK7Q8WTQ7 553 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 CELF1Q92879 486 aaKnown RBP11.05□□□□□ -0.64
LINC00342-202ENST00000448494 TTC17Q96AE7 1141 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 CCDC124Q96CT7 223 aaKnown RBP11.05□□□□□ -0.64
LINC00342-202ENST00000448494 FETUBQ9UGM5 382 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 ATP6V1HQ9UI12 483 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 WBP11Q9Y2W2 641 aaKnown RBP11.05□□□□□ -0.64
LINC00342-202ENST00000448494 A0A1W2PPM1 405 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 ATP6V1G2-DDX39BF2Z307 99 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 POC1B-GALNT4F8VUJ3 575 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 SNPHO15079 494 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 YKT6O15498 198 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 EPN2O95208 641 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 PLS3P13797 630 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 GSTM2P28161 218 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 HCAR3P49019 387 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 FKBP3Q00688 224 aaKnown RBP11.05□□□□□ -0.64
LINC00342-202ENST00000448494 METTL3Q86U44 580 aaKnown RBP11.05□□□□□ -0.64
LINC00342-202ENST00000448494 DNAAF5Q86Y56 855 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 ZC3H7AQ8IWR0 971 aaKnown RBP11.05□□□□□ -0.64
LINC00342-202ENST00000448494 DEPDC4Q8N2C3 294 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 TCAIMQ8N3R3 496 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 BCL7CQ8WUZ0 217 aaPredicted RBP11.05□□□□□ -0.64
LINC00342-202ENST00000448494 JPH3Q8WXH2 748 aaPredicted RBP11.05□□□□□ -0.64
LINC00342-202ENST00000448494 JDP2Q8WYK2 163 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 FEM1CQ96JP0 617 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 C9orf72Q96LT7 481 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 MYD88Q99836 296 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 RHOBTB2Q9BYZ6 727 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 ANKRD60Q9BZ19 345 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 TRIM15Q9C019 465 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 DNAI2Q9GZS0 605 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 PUS7LQ9H0K6 701 aaKnown RBP11.05□□□□□ -0.64
LINC00342-202ENST00000448494 NARFLQ9H6Q4 476 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 VRTNQ9H8Y1 702 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 UCKL1Q9NWZ5 548 aa11.05□□□□□ -0.64
LINC00342-202ENST00000448494 PKD2L1Q9P0L9 805 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms