RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 ERVMER34-1Q9H9K5 563 aa5.71□□□□□ -1.5
TM9SF3-202ENST00000443638 GRPEL1Q9HAV7 217 aa5.71□□□□□ -1.5
TM9SF3-202ENST00000443638 XAB2Q9HCS7 855 aaKnown RBP5.71□□□□□ -1.5
TM9SF3-202ENST00000443638 TLR8Q9NR97 1041 aaKnown RBP5.71□□□□□ -1.5
TM9SF3-202ENST00000443638 PCDHB16Q9NRJ7 776 aa5.71□□□□□ -1.5
TM9SF3-202ENST00000443638 RXFP3Q9NSD7 469 aa5.71□□□□□ -1.5
TM9SF3-202ENST00000443638 NDRG4Q9ULP0 352 aaKnown RBP5.71□□□□□ -1.5
TM9SF3-202ENST00000443638 SLC27A6Q9Y2P4 619 aa5.71□□□□□ -1.5
TM9SF3-202ENST00000443638 RAD54BQ9Y620 910 aa5.71□□□□□ -1.5
TM9SF3-202ENST00000443638 A0A1W2PQ09 198 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 TMEM232C9JQI7 657 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 M0QZQ0 153 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 STC2O76061 302 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 TGDSO95455 350 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 ITGB1P05556 798 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 GLI1P08151 1106 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 WEE2P0C1S8 567 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 TNNT1P13805 278 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 GLDCP23378 1020 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 CD6P30203 668 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 PPIFP30405 207 aaKnown RBP5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 ABCD1P33897 745 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 MSH2P43246 934 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 GATMP50440 423 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 PDE6CP51160 858 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 NCKAP1LP55160 1127 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 CDH15P55291 814 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 BPIFB3P59826 476 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 RBM6P78332 1123 aaKnown RBP5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 SATB1Q01826 763 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 PPARDQ03181 441 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 TFCP2Q12800 502 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 AIMP2Q13155 320 aaKnown RBP5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 CCNIQ14094 377 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 AAK1Q2M2I8 961 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 BMP2KLQ5H9B9 411 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 ZNF569Q5MCW4 686 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 FAM90A2PQ658T7 463 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 DTX1Q86Y01 620 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 CEP57L1Q8IYX8 460 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 OR8H3Q8N146 312 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 C17orf53Q8N3J3 647 aaPredicted RBP5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 NAT8LQ8N9F0 302 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 MSANTD4Q8NCY6 345 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 APPL2Q8NEU8 664 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 FLAD1Q8NFF5 587 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 OR14K1Q8NGZ2 314 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 RFWD2Q8NHY2 731 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 ZFP28Q8NHY6 868 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 ZBTB45Q96K62 511 aaPredicted RBP5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 YTHDC1Q96MU7 727 aaKnown RBP5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 NPAS1Q99742 590 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 KRTAP4-12Q9BQ66 201 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 CLSTN3Q9BQT9 956 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 NDST4Q9H3R1 872 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 SMOC2Q9H3U7 446 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 MROH8Q9H579 483 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 SEL1LQ9UBV2 794 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 ISY1Q9ULR0 285 aaKnown RBP5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 CDYLQ9Y232 598 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 DRG1Q9Y295 367 aaKnown RBP5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 PCDHB7Q9Y5E2 793 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 ENTPD2Q9Y5L3 495 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 FAM169AQ9Y6X4 670 aa5.7□□□□□ -1.5
TM9SF3-202ENST00000443638 LDLRAD4O15165 306 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 HTATSF1O43719 755 aaKnown RBP5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 SEC14L2O76054 403 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 OR2C1O95371 312 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 URODP06132 367 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 IFNAR1P17181 557 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 CDH2P19022 906 aaPredicted RBP5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 SPINK2P20155 84 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 GCSHP23434 173 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 ATP5DP30049 168 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 CLCN2P51788 898 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 ZNF41P51814 821 aaPredicted RBP5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 CDR1P51861 262 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 PRKAG1P54619 331 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 RRADP55042 308 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 RPL15P61313 204 aaKnown RBP5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 AIMP1Q12904 312 aaKnown RBP5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 USP10Q14694 798 aaKnown RBP5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 PRSS36Q5K4E3 855 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 LAYNQ6UX15 382 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 FAM83HQ6ZRV2 1179 aaPredicted RBP5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 ADGRA1Q86SQ6 560 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 IQCA1Q86XH1 822 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 XYLT1Q86Y38 959 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 CEP97Q8IW35 865 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 ADGRF2Q8IZF7 708 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 FRMD1Q8N878 549 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 ARL10Q8N8L6 244 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 OR8H1Q8NGG4 311 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 RUFY2Q8WXA3 655 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 TFAP2CQ92754 450 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 RNFT2Q96EX2 444 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 REXO5Q96IC2 774 aaKnown RBP5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 HAPLN3Q96S86 360 aa5.69□□□□□ -1.5
TM9SF3-202ENST00000443638 FTOQ9C0B1 505 aaKnown RBP eCLIP5.69□□□□□ -1.55e-11■■□□□ 13.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms