RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 MZB1Q8WU39 189 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 HTR3CQ8WXA8 447 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 APOPT1Q96IL0 206 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 SLC2A13Q96QE2 648 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 GAD1Q99259 594 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 KLF6Q99612 283 aaPredicted RBP10.79□□□□□ -0.68
CPNE1-218ENST00000439806 ULBP1Q9BZM6 244 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 XAB2Q9HCS7 855 aaKnown RBP10.79□□□□□ -0.68
CPNE1-218ENST00000439806 CRTAC1Q9NQ79 661 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 PRKAG3Q9UGI9 489 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 CDH9Q9ULB4 789 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 SLC12A4Q9UP95 1085 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 GIT1Q9Y2X7 761 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 STARD13Q9Y3M8 1113 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 PTCH2Q9Y6C5 1203 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 MAD1L1Q9Y6D9 718 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 USP3Q9Y6I4 520 aa10.79□□□□□ -0.68
CPNE1-218ENST00000439806 A0A0A0MRY4 1105 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 PPP1R12AO14974 1030 aaPredicted RBP10.78□□□□□ -0.68
CPNE1-218ENST00000439806 CREB3O43889 395 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 EDF1O60869 148 aaKnown RBP10.78□□□□□ -0.68
CPNE1-218ENST00000439806 AVILO75366 819 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 PIAS1O75925 651 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 KRT37O76014 449 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 BEST1O76090 585 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 METTL18O95568 372 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 APOEP02649 317 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 SLC10A3P09131 477 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 NEFHP12036 1026 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 CYBAP13498 195 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 VAV1P15498 845 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 PCSK1P29120 753 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 ALDH3A1P30838 453 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 RPL9P32969 192 aaKnown RBP10.78□□□□□ -0.68
CPNE1-218ENST00000439806 RAB27AP51159 221 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 SCNN1GP51170 649 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 AIF1P55008 147 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 FCGRTP55899 365 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 DAOAP59103 153 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 FAAP100Q0VG06 881 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 AP1B1Q10567 949 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 SREBF2Q12772 1141 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 SEMA5AQ13591 1074 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 SETDB1Q15047 1291 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 ANKRD20A2Q5SQ80 823 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 ANKRD20A1Q5TYW2 823 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 ANKRD20A3Q5VUR7 823 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 FYB2Q5VWT5 728 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 GDF6Q6KF10 455 aaPredicted RBP10.78□□□□□ -0.68
CPNE1-218ENST00000439806 CXCL17Q6UXB2 119 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 DENND5BQ6ZUT9 1274 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 PAQR9Q6ZVX9 377 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 PDZD4Q76G19 769 aaPredicted RBP10.78□□□□□ -0.68
CPNE1-218ENST00000439806 CAND1Q86VP6 1230 aaKnown RBP10.78□□□□□ -0.68
CPNE1-218ENST00000439806 CCDC33Q8N5R6 958 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 BANPQ8N9N5 519 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 GSDMBQ8TAX9 411 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 SLC7A14Q8TBB6 771 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 TCP10LQ8TDR4 215 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 ZNF75CPQ92670 426 aaPredicted RBP10.78□□□□□ -0.68
CPNE1-218ENST00000439806 LPPQ93052 612 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 SPATA13Q96N96 652 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 MAGEB5Q9BZ81 275 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 IQCGQ9H095 443 aaKnown RBP10.78□□□□□ -0.68
CPNE1-218ENST00000439806 UPF3AQ9H1J1 476 aaKnown RBP10.78□□□□□ -0.68
CPNE1-218ENST00000439806 ECT2Q9H8V3 914 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 RXFP1Q9HBX9 757 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 ARHGEF4Q9NR80 690 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 DTLQ9NZJ0 730 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 CACNG4Q9UBN1 327 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 GGT7Q9UJ14 662 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 ZNF180Q9UJW8 692 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 MFHAS1Q9Y4C4 1052 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 PCDHA11Q9Y5I1 949 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 USH1CQ9Y6N9 552 aa10.78□□□□□ -0.68
CPNE1-218ENST00000439806 SF3B1O75533 1304 aaKnown RBP eCLIP10.78□□□□□ -0.683e-7■■■■■ 90.2
CPNE1-218ENST00000439806 PATJQ8NI35 1801 aa10.77□□□□□ -0.68
CPNE1-218ENST00000439806 MYO16Q9Y6X6 1858 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 WDR91A4D1P6 747 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 CASTOR2A6NHX0 329 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 MEIS3P2A8K0S8 358 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 TRIM49D1C9J1S8 452 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 RNF103O00237 685 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 IGHA2P01877 340 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 SNRPAP09012 282 aaKnown RBP10.77□□□□□ -0.69
CPNE1-218ENST00000439806 TROVE2P10155 538 aaKnown RBP eCLIP10.77□□□□□ -0.69
CPNE1-218ENST00000439806 ODC1P11926 461 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 IBSPP21815 317 aaPredicted RBP10.77□□□□□ -0.69
CPNE1-218ENST00000439806 PRKCHP24723 683 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 ADRA1DP25100 572 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 NDUFV1P49821 464 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 SERPINB9P50453 376 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 CLCNKBP51801 687 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 TPI1P60174 286 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 PITX1P78337 314 aaPredicted RBP10.77□□□□□ -0.69
CPNE1-218ENST00000439806 SLC18A2Q05940 514 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 IFRD2Q12894 506 aaPredicted RBP10.77□□□□□ -0.69
CPNE1-218ENST00000439806 CRHR2Q13324 411 aa10.77□□□□□ -0.69
CPNE1-218ENST00000439806 PAFAH1B3Q15102 231 aaKnown RBP10.77□□□□□ -0.69
CPNE1-218ENST00000439806 PRKD1Q15139 912 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms