RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CCINQ13939 588 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 TRIM14Q14142 442 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 PREPLQ4J6C6 727 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-206ENST00000439717 SPECC1LQ69YQ0 1117 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 SARM1Q6SZW1 724 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 MMS22LQ6ZRQ5 1243 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 ARCQ7LC44 396 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 TAC4Q86UU9 113 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 TMEM25Q86YD3 366 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 CPXM2Q8N436 756 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 DTWD2Q8NBA8 298 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 SLC30A5Q8TAD4 765 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 SYT11Q9BT88 431 aa12.31□□□□□ -0.44
HSPG2-206ENST00000439717 IRX2Q9BZI1 471 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-206ENST00000439717 SEPT11Q9NVA2 429 aaKnown RBP12.31□□□□□ -0.44
HSPG2-206ENST00000439717 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.31□□□□□ -0.44
HSPG2-206ENST00000439717 LUC7L2Q9Y383 392 aaKnown RBP12.31□□□□□ -0.44
HSPG2-206ENST00000439717 KMT2EQ8IZD2 1858 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 IRAK2O43187 625 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 GALR2O43603 387 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-206ENST00000439717 GRAP2O75791 330 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 TRUB2O95900 331 aaKnown RBP12.3□□□□□ -0.44
HSPG2-206ENST00000439717 GYPCP04921 128 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 CALB1P05937 261 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 OPRD1P41143 372 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 SLC11A2P49281 568 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
HSPG2-206ENST00000439717 PTP4A2Q12974 167 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 MTA1Q13330 715 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 EIF4EBP2Q13542 120 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-206ENST00000439717 ANO4Q32M45 955 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 FBXO43Q4G163 708 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 FAM102AQ5T9C2 384 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-206ENST00000439717 E4F1Q66K89 784 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-206ENST00000439717 ACAD10Q6JQN1 1059 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 FSTL4Q6MZW2 842 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 CCDC26Q8TAB7 109 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 SLC39A13Q96H72 371 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 FCRL2Q96LA5 508 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-206ENST00000439717 XPO6Q96QU8 1125 aaKnown RBP12.3□□□□□ -0.44
HSPG2-206ENST00000439717 DDX50Q9BQ39 737 aaKnown RBP12.3□□□□□ -0.44
HSPG2-206ENST00000439717 C11orf70Q9BRQ4 267 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 BBS2Q9BXC9 721 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 CHRDQ9H2X0 955 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 HAUS4Q9H6D7 363 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 FAM204AQ9H8W3 233 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 ADAM22Q9P0K1 906 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 TMEM59LQ9UK28 342 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 STAP1Q9ULZ2 295 aa12.3□□□□□ -0.44
HSPG2-206ENST00000439717 ARIH1Q9Y4X5 557 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-206ENST00000439717 CACNG3O60359 315 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 ACSL4O60488 711 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 PENKP01210 267 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-206ENST00000439717 APOEP02649 317 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 CYBBP04839 570 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 TPM1P09493 284 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 SLC2A3P11169 496 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 GZMAP12544 262 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 TYRP14679 529 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 RNASE9P60153 205 aaKnown RBP12.29□□□□□ -0.44
HSPG2-206ENST00000439717 C2CD6Q53TS8 623 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 ADGRF1Q5T601 910 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 MAMSTRQ6ZN01 415 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 TPGS1Q6ZTW0 290 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 MON1BQ7L1V2 547 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 ZNF571Q7Z3V5 609 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-206ENST00000439717 VSTM4Q8IW00 320 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 ETFBKMTQ8IXQ9 262 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 OLIG1Q8TAK6 271 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 ADAM32Q8TC27 787 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 CPLX3Q8WVH0 158 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 NT5C3BQ969T7 300 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 VCPIP1Q96JH7 1222 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 PNKPQ96T60 521 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 NPY6RQ99463 290 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 RBSNQ9H1K0 784 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 FBRSL1Q9HCM7 1045 aaKnown RBP12.29□□□□□ -0.44
HSPG2-206ENST00000439717 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.29□□□□□ -0.44
HSPG2-206ENST00000439717 DDIT4Q9NX09 232 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 DEC1Q9P2X7 70 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 SLC12A6Q9UHW9 1150 aa12.29□□□□□ -0.44
HSPG2-206ENST00000439717 A0A0A0MRY4 1105 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 NEDD8-MDP1E9PL57 170 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 GOLGA8SH3BPF8 625 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 M0QYT0 321 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 GFRA2O00451 464 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 TULP3O75386 442 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 F9P00740 461 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 EGFP01133 1207 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 APODP05090 189 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 SERPING1P05155 500 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 COL9A1P20849 921 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 HNRNPH3P31942 346 aaKnown RBP12.28□□□□□ -0.44
HSPG2-206ENST00000439717 CASP14P31944 242 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 CCR1P32246 355 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 GRIA2P42262 883 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 SLC6A11P48066 632 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 PPP2R5DQ14738 602 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 SLC25A52Q3SY17 297 aa12.28□□□□□ -0.44
HSPG2-206ENST00000439717 MPPE1Q53F39 396 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms