RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 BNIP1Q12981 228 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 STILQ15468 1287 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 FAM133BQ5BKY9 247 aaKnown RBP16.28■□□□□ 0.2
TVP23C-203ENST00000428082 EFHC2Q5JST6 749 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 SPOUT1Q5T280 376 aaKnown RBP16.28■□□□□ 0.2
TVP23C-203ENST00000428082 HERC6Q8IVU3 1022 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 SLC4A11Q8NBS3 891 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 BCL7CQ8WUZ0 217 aaPredicted RBP16.28■□□□□ 0.2
TVP23C-203ENST00000428082 ALKBH8Q96BT7 664 aaKnown RBP16.28■□□□□ 0.2
TVP23C-203ENST00000428082 HAUS1Q96CS2 278 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 MCRS1Q96EZ8 462 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 SUSD3Q96L08 255 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 NCAPGQ9BPX3 1015 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 COLEC11Q9BWP8 271 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 MAK16Q9BXY0 300 aaKnown RBP16.28■□□□□ 0.2
TVP23C-203ENST00000428082 METTL5Q9NRN9 209 aaKnown RBP16.28■□□□□ 0.2
TVP23C-203ENST00000428082 ABCF3Q9NUQ8 709 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 VWA8A3KMH1 1905 aa16.28■□□□□ 0.2
TVP23C-203ENST00000428082 UBOX5O94941 541 aa16.27■□□□□ 0.2
TVP23C-203ENST00000428082 ZWINTO95229 277 aa16.27■□□□□ 0.2
TVP23C-203ENST00000428082 PAX3P23760 479 aa16.27■□□□□ 0.2
TVP23C-203ENST00000428082 GCAP28676 217 aa16.27■□□□□ 0.2
TVP23C-203ENST00000428082 ALDH7A1P49419 539 aaKnown RBP16.27■□□□□ 0.2
TVP23C-203ENST00000428082 TFDP2Q14188 446 aa16.27■□□□□ 0.2
TVP23C-203ENST00000428082 RFX6Q8HWS3 928 aa16.27■□□□□ 0.2
TVP23C-203ENST00000428082 PDIK1LQ8N165 341 aa16.27■□□□□ 0.2
TVP23C-203ENST00000428082 JOSD2Q8TAC2 188 aa16.27■□□□□ 0.2
TVP23C-203ENST00000428082 PHOSPHO2Q8TCD6 241 aa16.27■□□□□ 0.2
TVP23C-203ENST00000428082 DENND1AQ8TEH3 1009 aa16.27■□□□□ 0.2
TVP23C-203ENST00000428082 MTIF3Q9H2K0 278 aaKnown RBP16.27■□□□□ 0.2
TVP23C-203ENST00000428082 MLXIPLQ9NP71 852 aa16.27■□□□□ 0.2
TVP23C-203ENST00000428082 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.27■□□□□ 0.2
TVP23C-203ENST00000428082 A8MXQ7 604 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 E7ESA3 106 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 MICAL2O94851 1124 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 PDGFRBP09619 1106 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 ODC1P11926 461 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 WARSP23381 471 aaKnown RBP16.27■□□□□ 0.19
TVP23C-203ENST00000428082 ALDH3A1P30838 453 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 GNL1P36915 607 aaPredicted RBP16.27■□□□□ 0.19
TVP23C-203ENST00000428082 SETDB1Q15047 1291 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 SHHQ15465 462 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 NAT8LQ8N9F0 302 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 FBF1Q8TES7 1133 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 CPXM1Q96SM3 734 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 NT5C1AQ9BXI3 368 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 FRMD8Q9BZ67 464 aaPredicted RBP16.27■□□□□ 0.19
TVP23C-203ENST00000428082 GPR62Q9BZJ7 368 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 SNX25Q9H3E2 840 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 DPEP3Q9H4B8 488 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 ECT2Q9H8V3 914 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 INSL6Q9Y581 213 aa16.27■□□□□ 0.19
TVP23C-203ENST00000428082 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.26■□□□□ 0.19
TVP23C-203ENST00000428082 GABRDO14764 452 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 SPAG6O75602 509 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 TRUB2O95900 331 aaKnown RBP16.26■□□□□ 0.19
TVP23C-203ENST00000428082 CYP11A1P05108 521 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 ZNF143P52747 638 aaPredicted RBP16.26■□□□□ 0.19
TVP23C-203ENST00000428082 SNX16P57768 344 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 EIF3EP60228 445 aaKnown RBP16.26■□□□□ 0.19
TVP23C-203ENST00000428082 DYNLT1P63172 113 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 PDK4Q16654 411 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 KCNT2Q6UVM3 1135 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 ACOT1Q86TX2 421 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 UNC93AQ86WB7 457 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 MAP7D3Q8IWC1 876 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 PALM2Q8IXS6 379 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 TMEM86AQ8N2M4 240 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 LRRC8CQ8TDW0 803 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 CPT1BQ92523 772 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 ACSF2Q96CM8 615 aaPredicted RBP16.26■□□□□ 0.19
TVP23C-203ENST00000428082 PAIP2Q9BPZ3 127 aaKnown RBP16.26■□□□□ 0.19
TVP23C-203ENST00000428082 USP18Q9UMW8 372 aa16.26■□□□□ 0.19
TVP23C-203ENST00000428082 M0QYV0 167 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 ERBB2P04626 1255 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 FAM163BP0C2L3 166 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 NQO1P15559 274 aaKnown RBP16.25■□□□□ 0.19
TVP23C-203ENST00000428082 GPD1P21695 349 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 IL1R2P27930 398 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 RPL22P35268 128 aaKnown RBP16.25■□□□□ 0.19
TVP23C-203ENST00000428082 WDR4P57081 412 aaKnown RBP16.25■□□□□ 0.19
TVP23C-203ENST00000428082 ZKSCAN8Q15776 578 aaPredicted RBP16.25■□□□□ 0.19
TVP23C-203ENST00000428082 SEPT7Q16181 437 aaKnown RBP16.25■□□□□ 0.19
TVP23C-203ENST00000428082 HHATQ5VTY9 493 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 FUT10Q6P4F1 479 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 ARFGAP1Q8N6T3 406 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 COLGALT1Q8NBJ5 622 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 RAD9AQ99638 391 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 LPIN3Q9BQK8 851 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 CNPY3Q9BT09 278 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 ACSS3Q9H6R3 686 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 TXLNGQ9NUQ3 528 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 DDX43Q9NXZ2 648 aaKnown RBP16.25■□□□□ 0.19
TVP23C-203ENST00000428082 CYTH4Q9UIA0 394 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 PCDHB8Q9UN66 801 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 USH1CQ9Y6N9 552 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 RANBP2P49792 3224 aaKnown RBP16.25■□□□□ 0.19
TVP23C-203ENST00000428082 TNRC18O15417 2968 aaPredicted RBP16.25■□□□□ 0.19
TVP23C-203ENST00000428082 TLL1O43897 1013 aa16.25■□□□□ 0.19
TVP23C-203ENST00000428082 DCTN3O75935 186 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms