RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 CRYMQ14894 314 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 MYLK3Q32MK0 819 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 KCTD21Q4G0X4 260 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 PPP6R3Q5H9R7 873 aaPredicted RBP5.9□□□□□ -1.47
CNGA1-202ENST00000402813 SSH1Q8WYL5 1049 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 CGREF1Q99674 301 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 RAD21L1Q9H4I0 556 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 RAB20Q9NX57 234 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 RGL1Q9NZL6 768 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 DPP7Q9UHL4 492 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 SERTAD1Q9UHV2 236 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 RABGEF1Q9UJ41 708 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 STX8Q9UNK0 236 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 AGAP1Q9UPQ3 857 aa5.9□□□□□ -1.47
CNGA1-202ENST00000402813 RUVBL1Q9Y265 456 aaKnown RBP5.9□□□□□ -1.47
CNGA1-202ENST00000402813 ZNF263O14978 683 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 LILRB5O75023 590 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 SEC31AO94979 1220 aaKnown RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 IL18RAPO95256 599 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 FTCDO95954 541 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 HLA-DRAP01903 254 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ALPPP05187 535 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 INHBAP08476 426 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 SERPINF2P08697 491 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ARP10275 920 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ALPPL2P10696 532 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 JUPP14923 745 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ABCD3P28288 659 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ARL3P36405 182 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 PSMB10P40306 273 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 CETN2P41208 172 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 PCP4P48539 62 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 METAP1P53582 386 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 LIPEQ05469 1076 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 MTFR1Q15390 333 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 MEP1BQ16820 701 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 PGS1Q32NB8 556 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 SH3PXD2AQ5TCZ1 1133 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 MFSD5Q6N075 450 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 CNKSR3Q6P9H4 555 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 LINC00696Q6ZRV3 163 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 GATAD2AQ86YP4 633 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 SLC15A3Q8IY34 581 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 TRPV1Q8NER1 839 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 BAHD1Q8TBE0 780 aaPredicted RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 CALML6Q8TD86 181 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 PTPRN2Q92932 1015 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 MUL1Q969V5 352 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 NEIL1Q96FI4 390 aaPredicted RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 SIPA1Q96FS4 1042 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 NGLY1Q96IV0 654 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 FAM71F1Q96KD3 344 aaPredicted RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 RPGRIP1Q96KN7 1286 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ZNF560Q96MR9 790 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 RAB3IPQ96QF0 476 aaPredicted RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 TWNKQ96RR1 684 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 CCT7Q99832 543 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 HEPHQ9BQS7 1158 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 EDEM2Q9BV94 578 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 CARD14Q9BXL6 1004 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 THAP2Q9H0W7 228 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 SAYSD1Q9NPB0 183 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 FARSBQ9NSD9 589 aaKnown RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 DDX43Q9NXZ2 648 aaKnown RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 BACE2Q9Y5Z0 518 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 PTCH1Q13635 1447 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 MEIS2O14770 477 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 WDR46O15213 610 aaKnown RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 VEGFDO43915 354 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ZPR1O75312 459 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 LMNAP02545 664 aaKnown RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 CKMP06732 381 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ATP2A2P16615 1042 aaKnown RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 CHRM3P20309 590 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 U2AF2P26368 475 aaKnown RBP eCLIP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 PCSK1P29120 753 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 MDH1P40925 334 aaKnown RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 VEGFBP49765 207 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 PMP22Q01453 160 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ASPHQ12797 758 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 DDX39BQ13838 428 aaKnown RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 VEPH1Q14D04 833 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 SPCS2Q15005 226 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 HERC3Q15034 1050 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 POU4F3Q15319 338 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 RGS21Q2M5E4 152 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 HABP4Q5JVS0 413 aaKnown RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 TUBA3EQ6PEY2 450 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 DEGS2Q6QHC5 323 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ARFGAP2Q8N6H7 521 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 B4GALNT2Q8NHY0 566 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ZNF461Q8TAF7 563 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 FAM71BQ8TC56 605 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 PPP2R3CQ969Q6 453 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 PTERQ96BW5 349 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 MRPL38Q96DV4 380 aaKnown RBP5.89□□□□□ -1.47
CNGA1-202ENST00000402813 SNX27Q96L92 541 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 ORAI2Q96SN7 254 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 MIR1-1HGQ9H1L0 117 aa5.89□□□□□ -1.47
CNGA1-202ENST00000402813 GMIPQ9P107 970 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms