RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 BRD8Q9H0E9 1235 aa8.63□□□□□ -1.03
VPS36-201ENST00000378060 ZC4H2Q9NQZ6 224 aa8.63□□□□□ -1.03
VPS36-201ENST00000378060 PXMP2Q9NR77 195 aa8.63□□□□□ -1.03
VPS36-201ENST00000378060 PCDHB8Q9UN66 801 aa8.63□□□□□ -1.03
VPS36-201ENST00000378060 LZTS1Q9Y250 596 aa8.63□□□□□ -1.03
VPS36-201ENST00000378060 PKP3Q9Y446 797 aa8.63□□□□□ -1.03
VPS36-201ENST00000378060 PMPCBO75439 489 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 RHOBTB1O94844 696 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 FKBP9O95302 570 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 TGFB3P10600 412 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 TFE3P19532 575 aaPredicted RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 POU4F1Q01851 419 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 DGKZQ13574 1117 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 SEZ6Q53EL9 994 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 FKBP9P1Q75LS8 142 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 IRF2BP2Q7Z5L9 587 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 ACOT1Q86TX2 421 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 FAM71AQ8IYT1 594 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 MTMR14Q8NCE2 650 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 CYP2W1Q8TAV3 490 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 ART4Q93070 314 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 L3MBTL3Q96JM7 780 aaPredicted RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 ATP11BQ9Y2G3 1177 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 SSC5DA1L4H1 1573 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 KBTBD13C9JR72 458 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 SKAP2O75563 359 aaPredicted RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 DDHD2O94830 711 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 TNFAIP8O95379 198 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 ADRA1DP25100 572 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 SLC1A6P48664 564 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 PDK4Q16654 411 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 KIZQ2M2Z5 673 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 TRIM16LQ309B1 348 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 GRTP1Q5TC63 336 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 PTRHD1Q6GMV3 140 aaKnown RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 SZRD1Q7Z422 152 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 TRIM69Q86WT6 500 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 SLC22A9Q8IVM8 553 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 SLC25A41Q8N5S1 370 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 AGAP11Q8TF27 550 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 HAS1Q92839 578 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 MKL1Q969V6 931 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 ZNF333Q96JL9 665 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 MRIQ9BWK5 157 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 IL1RL2Q9HB29 575 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 AFF4Q9UHB7 1163 aaKnown RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 E9PBE3 544 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 EML1O00423 815 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 FSCN2O14926 492 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 DYNC1LI2O43237 492 aaPredicted RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 TPST1O60507 370 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 KLHL41O60662 606 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 NPTXRO95502 500 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 CBX6O95503 412 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 ATP6V1E1P36543 226 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 MMP13P45452 471 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 BMPR2Q13873 1038 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 SNX17Q15036 470 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 BMT2Q1RMZ1 405 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 N4BP2L1Q5TBK1 243 aaPredicted RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 BRSK2Q8IWQ3 736 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 TDRD5Q8NAT2 981 aaKnown RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 COLGALT1Q8NBJ5 622 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 SHC3Q92529 594 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 TMEM237Q96Q45 408 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 KCTD10Q9H3F6 313 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 ASB7Q9H672 318 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 EPS8L2Q9H6S3 715 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 SYTL2Q9HCH5 934 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 RRN3Q9NYV6 651 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 TUBGCP4Q9UGJ1 667 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 BARX2Q9UMQ3 279 aaPredicted RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 WDR90Q96KV7 1748 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 STAG3L1P0CL83 205 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 FUT2Q10981 343 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 FOXD4Q12950 439 aaPredicted RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 KRR1Q13601 381 aaKnown RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 OASLQ15646 514 aaKnown RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 NAIF1Q69YI7 327 aaPredicted RBP8.62□□□□□ -1.03
VPS36-201ENST00000378060 IYDQ6PHW0 289 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 FAM83AQ86UY5 434 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 SH3GL1Q99961 368 aa8.62□□□□□ -1.03
VPS36-201ENST00000378060 SCN4AP35499 1836 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 HEATR9A2RTY3 570 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 SAC3D1A6NKF1 404 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 HACD1B0YJ81 288 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 NFIBO00712 420 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 FGRP09769 529 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 ME2P23368 584 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 CYP2F1P24903 491 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 BACE1P56817 501 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 ITGA9Q13797 1035 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 IL17AQ16552 155 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 DGKDQ16760 1214 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 MFSD14CQ5VZR4 134 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 VPS50Q96JG6 964 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 CATSPER2Q96P56 530 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 C17orf80Q9BSJ5 609 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 CHST12Q9NRB3 414 aa8.61□□□□□ -1.03
VPS36-201ENST00000378060 GPATCH2LQ9NWQ4 482 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms