RNA–Protein interactions for RNA: ENST00000374602.2

TCEA3-202, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-202ENST00000374602 NIF3L1Q9GZT8 377 aa6.9□□□□□ -1.3
TCEA3-202ENST00000374602 FAM124BQ9H5Z6 455 aaPredicted RBP6.9□□□□□ -1.3
TCEA3-202ENST00000374602 NHEJ1Q9H9Q4 299 aaPredicted RBP6.9□□□□□ -1.3
TCEA3-202ENST00000374602 KCND1Q9NSA2 647 aa6.9□□□□□ -1.3
TCEA3-202ENST00000374602 DDX43Q9NXZ2 648 aaKnown RBP6.9□□□□□ -1.3
TCEA3-202ENST00000374602 DPP3Q9NY33 737 aa6.9□□□□□ -1.3
TCEA3-202ENST00000374602 PYCARDQ9ULZ3 195 aa6.9□□□□□ -1.3
TCEA3-202ENST00000374602 ARHGAP26Q9UNA1 814 aa6.9□□□□□ -1.3
TCEA3-202ENST00000374602 PCDHGA4Q9Y5G9 962 aa6.9□□□□□ -1.3
TCEA3-202ENST00000374602 GOLGA4Q13439 2230 aaKnown RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 ANO9A1A5B4 782 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 OTOL1A6NHN0 477 aaPredicted RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 PATE3B3GLJ2 98 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 CDX4O14627 284 aaPredicted RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 PPEF2O14830 753 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 AKR1B10O60218 316 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 NDUFA10O95299 355 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 STAU1O95793 577 aaKnown RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 ITGB3P05106 788 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 SYPP08247 313 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 KRT5P13647 590 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 TCF3P15923 654 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 HMGA1P17096 107 aaKnown RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 POLR2BP30876 1174 aaKnown RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 HOXC13P31276 330 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 EIF4A3P38919 411 aaKnown RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 USP8P40818 1118 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 EIF2DP41214 584 aaKnown RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 PRKCIP41743 596 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 LHX1P48742 406 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 MYL6P60660 151 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 IRX4P78413 519 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 ARID5AQ03989 594 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 GFPT1Q06210 699 aaPredicted RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 CUL2Q13617 745 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 MAPRE1Q15691 268 aaKnown RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 DUOXA1Q1HG43 343 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 CFAP221Q4G0U5 840 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 ZNF667Q5HYK9 610 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 INTS6LQ5JSJ4 861 aaKnown RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 BTBD8Q5XKL5 378 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 GJB7Q6PEY0 223 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 WDR59Q6PJI9 974 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 ARMCX6Q7L4S7 300 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 SCN4BQ8IWT1 228 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 FAM71AQ8IYT1 594 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 LRRC52Q8N7C0 313 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 KIAA1958Q8N8K9 716 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 SH3RF2Q8TEC5 729 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 USP33Q8TEY7 942 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 HPDLQ96IR7 371 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 CEP295NLQ96MC4 621 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 KREMEN1Q96MU8 473 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 ACBD6Q9BR61 282 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 GTPBP2Q9BX10 602 aaKnown RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 DNAI2Q9GZS0 605 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 VRTNQ9H8Y1 702 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 SUSD2Q9UGT4 822 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 INVSQ9Y283 1065 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 PCDHB9Q9Y5E1 797 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 EPN1Q9Y6I3 576 aaPredicted RBP6.89□□□□□ -1.31
TCEA3-202ENST00000374602 APC2O95996 2303 aa6.89□□□□□ -1.31
TCEA3-202ENST00000374602 DSPP15924 2871 aaKnown RBP6.88□□□□□ -1.31
TCEA3-202ENST00000374602 PTPRBP23467 1997 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 TP53BP1Q12888 1972 aaPredicted RBP6.88□□□□□ -1.31
TCEA3-202ENST00000374602 PCDH15Q96QU1 1955 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 ATXN2Q99700 1313 aaKnown RBP6.88□□□□□ -1.31
TCEA3-202ENST00000374602 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 TCRBV21S2A2A0A5A6 115 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 UPK3BL1B0FP48 263 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 EIF3CLB5ME19 914 aaKnown RBP6.88□□□□□ -1.31
TCEA3-202ENST00000374602 UPK3BL2E5RIL1 263 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 FOXN3O00409 490 aaPredicted RBP6.88□□□□□ -1.31
TCEA3-202ENST00000374602 TRIM66O15016 1216 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 ZNF500O60304 480 aaPredicted RBP6.88□□□□□ -1.31
TCEA3-202ENST00000374602 TADA3O75528 432 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 KLF8O95600 359 aaPredicted RBP6.88□□□□□ -1.31
TCEA3-202ENST00000374602 GNSP15586 552 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 HDCP19113 662 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 BCKDHBP21953 392 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 P2RY2P41231 377 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 MLLT3P42568 568 aaPredicted RBP6.88□□□□□ -1.31
TCEA3-202ENST00000374602 PPP3CCP48454 512 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 GPR15P49685 360 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 KIF11P52732 1056 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 TNNC1P63316 161 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 RPL6Q02878 288 aaKnown RBP6.88□□□□□ -1.31
TCEA3-202ENST00000374602 PTK2Q05397 1052 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 DDR2Q16832 855 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 WDR72Q3MJ13 1102 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 C10orf76Q5T2E6 689 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 E4F1Q66K89 784 aaPredicted RBP6.88□□□□□ -1.31
TCEA3-202ENST00000374602 HGSNATQ68CP4 663 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 SPOPLQ6IQ16 392 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 SLC23A3Q6PIS1 610 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 RAD9BQ6WBX8 426 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 IRF2BP2Q7Z5L9 587 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 KIAA1328Q86T90 577 aa6.88□□□□□ -1.31
TCEA3-202ENST00000374602 TMEM150AQ86TG1 271 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms